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hypothetical_protein_TW95_gp0033

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0033__YP_009119002__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119002 ↗
Protein ID:
hypothetical_protein_TW95_gp0033
Kingdom:
euk

Quality

75.5 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-83
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ozgA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.70 50.0 4.32e-01 77.0% 55.8%
1y0nA00 1.10.10.610 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › YehU-like 0.68 48.0 4.88e-01 74.3% 88.7%
3d3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 46.0 3.63e-01 77.0% 45.9%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 32.0 3.56e-01 100.0% 63.2%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 36.0 4.12e-01 100.0% 86.5%
7pk0A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 44.0 3.76e-01 87.8% 79.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.56 34.0 3.99e-01 98.6% 97.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 3.69e-01 100.0% 75.4%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.88e-01 97.3% 90.0%
4grhA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.52 43.0 2.79e-01 100.0% 84.5%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 37.0 3.78e-01 81.1% 98.6%
1jw9B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 38.0 2.81e-01 86.5% 87.5%
6q3wD01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.50 40.0 3.19e-01 97.3% 66.8%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4993985 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.69 51.0 3.95e-01 79.7% 48.2%
3603162 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.62 45.0 4.26e-01 87.8% 64.4%
3277466 220.1.1.305 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26662 0.61 50.0 4.26e-01 93.2% 83.1%
4997198 213.1.1.27 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.60 44.0 3.63e-01 79.7% 52.1%
3913691 213.1.1.19 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.59 44.0 3.56e-01 82.4% 39.4%
3856485 213.1.1.16 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.59 44.0 3.43e-01 82.4% 38.9%
4025894 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 37.0 3.20e-01 86.5% 43.1%
5004390 2484.4.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.59 35.0 3.02e-01 77.0% 39.1%
3634384 4292.2.1.2 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B 0.59 51.0 4.30e-01 98.6% 60.0%
4945717 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 47.0 3.90e-01 89.2% 54.1%
3390570 213.1.1.19 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.57 45.0 3.67e-01 89.2% 43.8%
3988062 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 40.0 3.75e-01 100.0% 61.1%
4670754 304.51.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › RAMPs 0.55 44.0 3.31e-01 100.0% 33.2%
5011373 2004.1.1.342 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_10 0.55 45.0 2.99e-01 95.9% 92.5%
3228567 2484.1.1.162 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box 0.54 33.0 2.71e-01 100.0% 32.9%
3455400 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.54 42.0 2.89e-01 90.5% 94.3%
3505024 7525.1.1.1 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.53 37.0 2.59e-01 74.3% 93.8%
3546981 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.52 46.0 3.76e-01 100.0% 79.3%
3839135 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.52 42.0 2.64e-01 89.2% 83.4%
3259273 5.1.5.212 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_RIG_1st, Beta-prop_RIG_2nd 0.52 43.0 2.53e-01 100.0% 12.1%
3569527 213.1.1.16 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 42.0 3.33e-01 93.2% 43.6%
4961211 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.51 41.0 2.66e-01 89.2% 92.0%
5049257 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 41.0 2.72e-01 94.6% 93.2%
3186839 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 40.0 2.59e-01 86.5% 96.5%
5001714 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.51 41.0 2.57e-01 89.2% 93.2%
3211051 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.50 41.0 3.31e-01 93.2% 67.1%
D2 medium residues 84-163
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_1039__YP_008319982__Pandoravirus_dulcis__1349409__D91-161