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hypothetical_protein_TW95_gp0046
Euk-VirPandoravirus_inopinatum
hypothetical_protein_TW95_gp0046__YP_009119015__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009119015 ↗
- Protein ID:
- hypothetical_protein_TW95_gp0046
- Kingdom:
- euk
Quality
65.1
mean pLDDT
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 85-244
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.70 | 32.0 | 3.94e-01 | 70.6% | 66.7% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 32.0 | 4.72e-01 | 71.9% | 96.0% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 36.0 | 4.54e-01 | 71.2% | 84.5% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.66 | 33.0 | 4.57e-01 | 75.0% | 97.4% |
| 5o5jT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.66 | 30.0 | 4.05e-01 | 70.6% | 80.0% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 32.0 | 4.57e-01 | 75.0% | 100.0% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 32.0 | 4.49e-01 | 73.1% | 100.0% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.65 | 40.0 | 4.85e-01 | 73.8% | 97.0% |
| 2ehwA00 | 6.10.140.1220 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 32.0 | 3.77e-01 | 94.4% | 66.1% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.59 | 35.0 | 4.18e-01 | 91.3% | 83.3% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.59 | 32.0 | 4.20e-01 | 77.5% | 100.0% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 33.0 | 4.17e-01 | 87.5% | 95.6% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.58 | 30.0 | 4.07e-01 | 73.1% | 98.7% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.58 | 30.0 | 4.03e-01 | 85.0% | 100.0% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.58 | 30.0 | 4.08e-01 | 85.6% | 98.8% |
| 2kc7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 31.0 | 3.86e-01 | 88.7% | 83.8% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.58 | 31.0 | 4.01e-01 | 72.5% | 90.3% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.53 | 31.0 | 3.61e-01 | 76.9% | 78.9% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.53 | 36.0 | 4.21e-01 | 74.4% | 98.2% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 30.0 | 3.73e-01 | 86.3% | 87.3% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.52 | 33.0 | 3.51e-01 | 92.5% | 69.4% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 33.0 | 3.77e-01 | 74.4% | 85.2% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.51 | 33.0 | 3.40e-01 | 92.5% | 67.5% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4147954 | 604.34.1.1 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in arginine decarboxylase › Helical bundle domain in arginine decarboxylase › Arg_decarb_HB | 0.75 | 35.0 | 4.67e-01 | 92.5% | 80.0% |
| 3481781 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.69 | 33.0 | 4.67e-01 | 74.4% | 92.5% |
| 4358621 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.67 | 30.0 | 4.17e-01 | 70.0% | 83.5% |
| 4668964 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.67 | 30.0 | 4.00e-01 | 70.0% | 77.6% |
| 3527051 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 35.0 | 4.44e-01 | 73.8% | 85.3% |
| 3407072 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 33.0 | 4.59e-01 | 72.5% | 96.2% |
| 3926031 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 37.0 | 4.70e-01 | 90.0% | 92.6% |
| 4956162 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.65 | 33.0 | 4.49e-01 | 81.2% | 100.0% |
| 1145756 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.65 | 34.0 | 3.94e-01 | 73.8% | 68.4% |
| 3641172 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.65 | 35.0 | 4.43e-01 | 78.1% | 91.1% |
| 957021 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.64 | 40.0 | 4.52e-01 | 73.8% | 81.5% |
| 3957298 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.64 | 32.0 | 4.07e-01 | 72.5% | 81.1% |
| 4004067 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 34.0 | 4.61e-01 | 73.1% | 97.6% |
| 5078867 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 35.0 | 4.59e-01 | 71.9% | 100.0% |
| 3279151 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.61 | 35.0 | 4.46e-01 | 88.1% | 97.8% |
| 5008560 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.59 | 33.0 | 4.02e-01 | 86.3% | 81.9% |
| 4936976 | 633.10.1.2 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Bbp7-like | 0.59 | 36.0 | 4.36e-01 | 92.5% | 91.4% |
| 54292 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.59 | 36.0 | 4.20e-01 | 91.3% | 84.3% |
| 3187407 | 633.10.1.4 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › DUF3429 | 0.58 | 36.0 | 3.59e-01 | 92.5% | 58.2% |
| 4474203 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.56 | 40.0 | 3.87e-01 | 72.5% | 91.7% |
| 4975227 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 35.0 | 3.88e-01 | 96.2% | 76.9% |
| 5041910 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.54 | 31.0 | 4.05e-01 | 83.1% | 98.9% |
| 5039441 | 633.21.1.47 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › SPW | 0.54 | 33.0 | 3.83e-01 | 87.5% | 87.3% |
| 2391944 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.53 | 28.0 | 3.58e-01 | 83.7% | 88.6% |
| 4646569 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.53 | 29.0 | 3.67e-01 | 74.4% | 89.5% |
| 3630440 | 109.4.1.1328 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26034 | 0.52 | 32.0 | 3.61e-01 | 85.6% | 81.7% |
| 4998720 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.51 | 47.0 | 3.97e-01 | 100.0% | 93.0% |