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hypothetical_protein_TW95_gp0084

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0084__YP_009119053__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119053 ↗
Protein ID:
hypothetical_protein_TW95_gp0084
Kingdom:
euk

Quality

67.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 62-95
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00646.39 best F-box 21.6 2.10e-04 97.1% 69.8%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.91 80.0 4.65e-01 100.0% 13.9%
2p1oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.89 75.0 7.36e-01 100.0% 92.1%
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.86 72.0 6.65e-01 100.0% 73.9%
3ogkB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.85 73.0 6.96e-01 100.0% 85.4%
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.82 67.0 6.42e-01 100.0% 85.7%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.80 64.0 4.95e-01 100.0% 41.4%
2e31A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.80 65.0 5.51e-01 100.0% 59.7%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.79 65.0 4.22e-01 100.0% 21.7%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.77 60.0 4.52e-01 100.0% 41.4%
4c0dC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.75 62.0 4.12e-01 100.0% 23.9%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.73 57.0 4.45e-01 100.0% 42.0%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.65 50.0 4.49e-01 100.0% 82.5%
1h1oA02 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.57 41.0 3.23e-01 82.4% 100.0%
2e52B01 3.40.91.70 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII 0.54 39.0 2.56e-01 100.0% 26.3%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3569619 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.96 86.0 7.80e-01 100.0% 75.6%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.94 84.0 6.67e-01 100.0% 52.3%
3680688 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.93 82.0 4.52e-01 100.0% 8.0%
4017103 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.93 81.0 4.54e-01 100.0% 9.4%
4011424 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.93 80.0 5.85e-01 100.0% 37.8%
3189379 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.92 80.0 6.45e-01 100.0% 52.3%
3672250 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.92 81.0 4.93e-01 100.0% 17.9%
3687689 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.92 79.0 4.45e-01 100.0% 10.0%
3221696 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.91 78.0 4.37e-01 100.0% 8.5%
3628631 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.91 79.0 6.56e-01 100.0% 56.7%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.91 78.0 7.16e-01 100.0% 75.6%
None — 0.90 78.0 4.20e-01 100.0% 5.7%
3171073 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 78.0 5.33e-01 100.0% 29.6%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 79.0 5.96e-01 100.0% 45.0%
3731257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 77.0 7.42e-01 100.0% 85.0%
3413201 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.90 78.0 4.53e-01 100.0% 12.9%
3341479 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 77.0 6.10e-01 100.0% 48.6%
3320433 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 76.0 6.37e-01 100.0% 60.0%
3655623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 77.0 5.29e-01 100.0% 31.3%
4000706 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 77.0 6.83e-01 100.0% 72.0%
3323668 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 76.0 5.91e-01 100.0% 48.0%
3337545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 77.0 6.21e-01 100.0% 55.4%
3355293 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 75.0 5.37e-01 100.0% 36.0%
3762363 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 75.0 4.09e-01 100.0% 6.4%
3664817 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 75.0 5.71e-01 100.0% 45.0%
3349711 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 75.0 6.90e-01 100.0% 75.6%
3230376 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.88 75.0 4.10e-01 100.0% 7.2%
3320386 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 75.0 5.49e-01 100.0% 40.0%
3542973 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.88 75.0 4.21e-01 100.0% 9.9%
3461050 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 74.0 6.61e-01 100.0% 68.0%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 75.0 5.75e-01 100.0% 46.2%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 74.0 5.54e-01 100.0% 42.4%
3217628 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 73.0 7.02e-01 100.0% 85.0%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 72.0 5.57e-01 100.0% 45.0%
3303934 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 73.0 6.77e-01 100.0% 75.6%
3259075 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 73.0 5.63e-01 100.0% 47.4%
3635440 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 74.0 6.61e-01 100.0% 68.0%
3215069 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 74.0 6.80e-01 100.0% 75.6%
3206932 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.86 71.0 4.06e-01 100.0% 9.4%
3238357 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 69.0 6.94e-01 94.1% 94.3%
3837286 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 71.0 5.32e-01 100.0% 40.0%
3579393 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 70.0 7.00e-01 100.0% 94.3%
1807269 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 72.0 6.54e-01 100.0% 70.8%
3189161 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.85 70.0 3.93e-01 100.0% 8.0%
3439461 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 72.0 5.90e-01 100.0% 55.4%
3724474 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.85 70.0 3.87e-01 100.0% 7.1%
3866275 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.84 69.0 3.91e-01 100.0% 9.0%
3245517 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 70.0 6.78e-01 100.0% 85.0%
3358453 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 68.0 5.56e-01 100.0% 51.4%
3227830 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 70.0 6.74e-01 100.0% 87.5%
3811913 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 69.0 6.26e-01 100.0% 68.0%
3837673 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 68.0 6.39e-01 100.0% 80.0%
3856479 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.83 68.0 3.79e-01 100.0% 8.4%
3422328 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 66.0 5.10e-01 100.0% 42.4%
4021018 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.82 72.0 3.85e-01 100.0% 5.1%
3194542 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 69.0 3.77e-01 100.0% 7.0%
3407033 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 66.0 5.30e-01 100.0% 48.0%
3459106 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 67.0 6.27e-01 100.0% 75.6%
3688419 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 65.0 6.37e-01 100.0% 85.0%
3470430 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 68.0 6.54e-01 100.0% 95.0%
3239855 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 66.0 6.19e-01 100.0% 77.8%
3244730 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 66.0 6.20e-01 100.0% 75.6%
3212367 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 65.0 6.38e-01 100.0% 87.5%
3273645 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 68.0 5.25e-01 100.0% 51.2%
3339367 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 67.0 6.07e-01 100.0% 73.5%
3188576 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 67.0 5.12e-01 100.0% 42.4%
3396134 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 64.0 6.43e-01 100.0% 97.1%
3531870 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 5.98e-01 100.0% 74.0%
3527636 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 64.0 4.90e-01 100.0% 40.4%
3443639 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 66.0 5.94e-01 100.0% 80.0%
3236811 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 64.0 6.02e-01 100.0% 77.8%
3363836 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 66.0 5.02e-01 100.0% 43.5%
2899589 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 66.0 5.25e-01 100.0% 48.6%
3344543 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 65.0 5.01e-01 100.0% 43.5%
3469709 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 64.0 4.93e-01 100.0% 42.4%
3595717 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 62.0 5.25e-01 97.1% 55.4%
4019682 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 63.0 4.76e-01 100.0% 43.2%
3639601 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.79 62.0 3.43e-01 100.0% 6.2%
3238761 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 62.0 6.10e-01 100.0% 87.5%
3653326 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 64.0 6.02e-01 100.0% 82.2%
3214753 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 63.0 6.30e-01 97.1% 97.1%
3833527 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 62.0 5.38e-01 100.0% 60.0%
3824263 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 62.0 3.55e-01 100.0% 9.7%
3272640 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.77 62.0 3.68e-01 100.0% 21.1%
3633495 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 60.0 5.91e-01 100.0% 87.5%
3301911 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 59.0 4.70e-01 100.0% 42.4%
3339620 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 64.0 5.94e-01 100.0% 80.0%
3852694 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 58.0 3.60e-01 100.0% 16.7%
3228948 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 57.0 5.64e-01 100.0% 92.5%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 59.0 5.74e-01 100.0% 97.5%
3726236 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 57.0 4.54e-01 100.0% 42.4%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 55.0 4.52e-01 100.0% 46.3%
3466008 207.1.1.96 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 0.73 58.0 3.32e-01 100.0% 8.0%
3230101 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 55.0 3.66e-01 100.0% 24.1%
3257315 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 57.0 4.71e-01 97.1% 81.4%
4012559 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 54.0 4.34e-01 100.0% 44.7%
3237435 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 59.0 5.72e-01 100.0% 95.0%
3203146 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.69 56.0 4.00e-01 100.0% 33.0%
3236656 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.66 50.0 3.54e-01 100.0% 50.7%
D2 medium residues 229-354_396-427
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_1003__YP_008319937__Pandoravirus_dulcis__1349409__D217-336_375-406