←Back to structures
hypothetical_protein_TW95_gp0137
Euk-VirPandoravirus_inopinatum
hypothetical_protein_TW95_gp0137__YP_009119106__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009119106 ↗
- Protein ID:
- hypothetical_protein_TW95_gp0137
- Kingdom:
- euk
Quality
52.3
mean pLDDT
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 187-245
D2
medium
residues 369-453
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4in3B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 50.0 | 3.01e-01 | 89.4% | 17.1% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.59 | 46.0 | 4.58e-01 | 88.2% | 83.0% |
| 3umvA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 46.0 | 3.78e-01 | 89.4% | 46.8% |
| 4abnA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 50.0 | 3.47e-01 | 96.5% | 33.3% |
| 8f5oD01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 48.0 | 3.19e-01 | 100.0% | 51.8% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 47.0 | 4.43e-01 | 96.5% | 88.9% |
| 3a11B01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.55 | 46.0 | 4.16e-01 | 96.5% | 91.2% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 38.0 | 3.67e-01 | 81.2% | 62.9% |
| 3t33A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 46.0 | 3.01e-01 | 98.8% | 28.7% |
| 3zheC01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 43.0 | 3.54e-01 | 96.5% | 62.0% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.53 | 41.0 | 3.77e-01 | 87.1% | 63.9% |
| 5fzsA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 38.0 | 3.59e-01 | 94.1% | 61.7% |
| 1zbpA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 35.0 | 3.57e-01 | 96.5% | 70.6% |
| 1qf9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 3.25e-01 | 88.2% | 75.3% |
| 2g2dA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.52 | 41.0 | 3.42e-01 | 88.2% | 72.5% |
| 2uy1A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 45.0 | 2.85e-01 | 95.3% | 20.8% |
| 2bvlA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 35.0 | 3.55e-01 | 87.1% | 69.8% |
| 1yz4B01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 44.0 | 3.71e-01 | 97.6% | 62.1% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 40.0 | 3.76e-01 | 84.7% | 93.5% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 40.0 | 3.85e-01 | 85.9% | 88.9% |
| 1iyxA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 41.0 | 3.63e-01 | 87.1% | 92.8% |
| 2b1eA01 | 1.20.58.1150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 40.0 | 4.02e-01 | 83.5% | 84.9% |
| 8g0lB01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 43.0 | 2.85e-01 | 94.1% | 22.4% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 41.0 | 3.38e-01 | 85.9% | 85.4% |
| 1elrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 44.0 | 3.87e-01 | 98.8% | 65.6% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 35.0 | 3.47e-01 | 96.5% | 68.9% |
| 2ooeA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 43.0 | 3.30e-01 | 92.9% | 53.7% |
| 2gw1A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 43.0 | 2.86e-01 | 95.3% | 26.1% |
| 6xssA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 38.0 | 4.10e-01 | 94.1% | 98.6% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 42.0 | 3.25e-01 | 98.8% | 42.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034377 | 4982.1.1.2 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › RsbU_N | 0.69 | 53.0 | 5.29e-01 | 84.7% | 80.0% |
| 3772587 | 109.4.1.1403 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TBCD, ARM_TBCD_2nd | 0.64 | 53.0 | 3.59e-01 | 92.9% | 38.2% |
| 3545456 | 109.4.1.913 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TBCD | 0.64 | 53.0 | 3.76e-01 | 92.9% | 46.7% |
| 3166518 | 109.4.1.307 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2 | 0.63 | 55.0 | 3.42e-01 | 100.0% | 33.1% |
| 2150121 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.60 | 53.0 | 3.67e-01 | 100.0% | 51.5% |
| 3284516 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.60 | 47.0 | 4.08e-01 | 88.2% | 74.3% |
| 3353480 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 50.0 | 4.46e-01 | 98.8% | 69.6% |
| 3173254 | 109.4.1.273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4KB-PIK1_PIK | 0.57 | 50.0 | 4.12e-01 | 100.0% | 53.1% |
| 3403744 | 109.4.1.3429 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28853, PF28855, PF28893 | 0.57 | 49.0 | 3.06e-01 | 100.0% | 34.4% |
| 4946663 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 48.0 | 4.25e-01 | 100.0% | 70.4% |
| 3168249 | 109.4.1.1231 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_NAA35 | 0.56 | 44.0 | 2.90e-01 | 87.1% | 39.5% |
| 4298891 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.56 | 45.0 | 3.21e-01 | 89.4% | 72.6% |
| 4952396 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.55 | 39.0 | 2.92e-01 | 75.3% | 67.8% |
| 3725031 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 44.0 | 3.65e-01 | 90.6% | 68.1% |
| 3214191 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 41.0 | 3.73e-01 | 81.2% | 83.5% |
| 3870558 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 40.0 | 3.62e-01 | 80.0% | 81.7% |
| 5027639 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.53 | 41.0 | 2.71e-01 | 88.2% | 32.4% |
| 5070405 | 109.4.1.363 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tcf25 | 0.52 | 46.0 | 3.23e-01 | 100.0% | 80.7% |
| 3782809 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.52 | 45.0 | 3.59e-01 | 97.6% | 95.0% |
| 3707238 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 41.0 | 3.73e-01 | 84.7% | 78.3% |
| 3892495 | 604.1.1.7 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_plectin_7 | 0.52 | 41.0 | 3.63e-01 | 83.5% | 80.0% |
| 3514718 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.52 | 40.0 | 3.62e-01 | 82.4% | 83.5% |
| 3887920 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 39.0 | 3.22e-01 | 81.2% | 66.5% |
| 3601705 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 45.0 | 3.07e-01 | 100.0% | 66.3% |
| 3460111 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.51 | 40.0 | 2.64e-01 | 82.4% | 29.4% |
| 3601815 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.51 | 42.0 | 3.12e-01 | 90.6% | 75.6% |
| 3878975 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.51 | 41.0 | 3.47e-01 | 85.9% | 64.3% |
| 4223117 | 604.12.1.4 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 | 0.51 | 40.0 | 3.35e-01 | 82.4% | 64.3% |
| 3704667 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.51 | 43.0 | 3.02e-01 | 100.0% | 59.1% |
| 4019869 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 3.46e-01 | 100.0% | 46.0% |
| 3576959 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.51 | 44.0 | 3.49e-01 | 98.8% | 74.6% |
| 5018337 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.51 | 45.0 | 3.67e-01 | 100.0% | 86.3% |
| 3580104 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 38.0 | 3.68e-01 | 80.0% | 91.6% |
| 3872220 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.50 | 39.0 | 3.60e-01 | 83.5% | 83.6% |
| 3520040 | 604.5.1.3 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ArAE_1_C | 0.50 | 44.0 | 3.49e-01 | 96.5% | 98.8% |
D3
medium
residues 488-575
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5haxA01 | 1.20.58.1780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 47.0 | 3.44e-01 | 84.1% | 56.8% |
| 2xrhA00 | 1.20.120.1430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HP0721 helical bundle | 0.59 | 44.0 | 4.31e-01 | 83.0% | 81.0% |
| 3qavA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 47.0 | 4.11e-01 | 94.3% | 83.6% |
| 1z72A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.55 | 40.0 | 3.01e-01 | 76.1% | 40.3% |
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.54 | 40.0 | 3.62e-01 | 84.1% | 57.6% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 42.0 | 3.85e-01 | 88.6% | 64.2% |
| 3op2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 35.0 | 3.14e-01 | 77.3% | 44.7% |
| 2e9xD01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 42.0 | 3.72e-01 | 89.8% | 90.5% |
| 4n6cB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.52 | 44.0 | 3.52e-01 | 95.5% | 60.2% |
| 6tblB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 42.0 | 3.91e-01 | 89.8% | 86.5% |
| 3c7jA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.51 | 39.0 | 3.33e-01 | 81.8% | 79.5% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 40.0 | 4.21e-01 | 86.4% | 95.0% |
| 3mw6B00 | 1.10.1710.10 | Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain | 0.50 | 38.0 | 3.79e-01 | 84.1% | 84.0% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 37.0 | 3.67e-01 | 77.3% | 79.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616859 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.71 | 54.0 | 5.74e-01 | 97.7% | 94.7% |
| 3545138 | 3990.1.1.3 ↗ | few secondary structure elements › Zinc finger domain in TOPLESS related protein 2 (TPR2) › Zinc finger domain in TOPLESS related protein 2 (TPR2) › Zinc finger domain in TOPLESS related protein 2 (TPR2) › WDR47_COR | 0.59 | 42.0 | 4.59e-01 | 79.5% | 95.7% |
| 3682587 | 109.4.1.1731 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N | 0.56 | 50.0 | 3.35e-01 | 100.0% | 25.7% |
| 3827754 | 109.4.1.888 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_N | 0.54 | 42.0 | 3.92e-01 | 98.9% | 67.0% |
D4
medium
residues 576-637