←Back to structures

hypothetical_protein_TW95_gp0149

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0149__YP_009119118__Pandoravirus_inopinatum__1605721

Identity

Accession:: YP_009119118 ↗
Protein ID:: hypothetical_protein_TW95_gp0149
Kingdom:: euk

Quality

75.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-85

PDB

Domain cluster: representative

CATH (31)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1l7vA00	1.10.3470.10	Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC	0.66	47.0	3.20e-01	75.3%	31.3%
1m5yA01	1.10.4030.10	Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain	0.65	41.0	3.66e-01	92.9%	43.5%
4uw9A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.65	39.0	3.96e-01	76.5%	60.2%
6vbkB02	1.20.58.1480	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.63	51.0	5.34e-01	92.9%	97.4%
7craA02	1.20.58.1480	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.63	55.0	5.44e-01	100.0%	93.5%
3ljcA02	1.20.58.1480	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.62	54.0	4.79e-01	100.0%	66.7%
3s64A00	1.10.225.10	Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like	0.61	35.0	3.59e-01	83.5%	58.0%
3qwlA02	1.10.8.680	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ypt/Rab-GAP domain of gyp1p, domain 2	0.60	45.0	4.71e-01	81.2%	98.7%
7m2wE01	1.20.120.1900	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain	0.60	47.0	3.24e-01	85.9%	71.6%
1x3aA00	1.10.3970.10	Mainly Alpha › Orthogonal Bundle › BSD domain-like fold › BSD domain	0.59	42.0	4.04e-01	96.5%	64.0%
4it4A02	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.59	41.0	4.08e-01	72.9%	93.4%
1gxyA00	3.90.176.10	Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1	0.59	42.0	3.09e-01	74.1%	87.4%
1sqgA01	1.10.940.10	Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like	0.57	40.0	3.46e-01	72.9%	70.9%
4zqeA03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.57	42.0	4.10e-01	77.6%	95.8%
3t6gB00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.57	45.0	3.92e-01	87.1%	94.0%
6t0bc02	1.20.120.80	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle	0.54	43.0	3.35e-01	87.1%	62.3%
1sz2A02	3.40.367.20	Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 ›	0.54	38.0	3.03e-01	76.5%	57.5%
3k3oA02	1.20.58.1360	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.54	37.0	3.74e-01	70.6%	96.4%
1ic8A01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.54	46.0	4.48e-01	92.9%	86.2%
3v53E00	1.20.1390.10	Mainly Alpha › Up-down Bundle › PWI domain › PWI domain	0.52	42.0	4.02e-01	88.2%	95.1%
1yisA01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.52	37.0	3.52e-01	90.6%	62.1%
1ax8A00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.52	41.0	3.61e-01	85.9%	92.3%
1eq1A00	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.52	42.0	3.41e-01	89.4%	65.1%
1lkvX02	1.10.220.30	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain	0.52	40.0	3.50e-01	83.5%	94.7%
1urvA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	38.0	3.14e-01	84.7%	44.2%
2qgaB01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.51	40.0	3.67e-01	95.3%	64.0%
3gi7A00	1.20.1270.180	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.50	44.0	4.21e-01	100.0%	87.4%
6oh6A00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.50	45.0	3.07e-01	100.0%	88.4%
2hoqA02	1.10.150.520	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.50	36.0	3.70e-01	76.5%	89.9%
4dq5B00	1.10.530.50	Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40	0.50	43.0	3.58e-01	100.0%	93.1%
1wvtA00	1.20.1200.10	Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like	0.50	44.0	3.71e-01	100.0%	90.5%

ECOD (23)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3236470	106.1.1.0 ↗	alpha arrays › Globin-like › Globin-like › Globin-like	0.68	43.0	3.39e-01	90.6%	31.4%
4158967	3883.1.1.1 ↗	alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf	0.64	50.0	3.83e-01	83.5%	72.1%
3505840	1025.1.1.0 ↗	alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain	0.62	43.0	4.24e-01	70.6%	97.8%
1233603	2008.1.1.59 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1	0.62	39.0	2.51e-01	81.2%	13.8%
3862622	601.1.1.1 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin	0.61	50.0	3.56e-01	88.2%	44.4%
4671536	3718.1.1.1 ↗	alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT	0.60	41.0	3.98e-01	70.6%	87.4%
3478190	160.1.1.4 ↗	alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_VA_C	0.58	44.0	3.65e-01	82.4%	96.1%
3520932	1075.1.1.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain	0.58	47.0	2.86e-01	90.6%	28.8%
4571267	1079.1.1.13 ↗	alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp	0.56	45.0	3.53e-01	85.9%	60.1%
3965610	3831.1.1.1 ↗	alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI	0.56	48.0	4.84e-01	100.0%	92.9%
4207992	2002.1.1.56 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus	0.56	42.0	2.81e-01	78.8%	93.8%
3467440	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.55	41.0	3.06e-01	81.2%	52.4%
4409479	109.1.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C	0.53	37.0	3.36e-01	71.8%	85.2%
3704762	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.52	41.0	3.62e-01	84.7%	82.4%
3973359	5051.1.1.12 ↗	alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Trp_Tyr_perm	0.52	45.0	2.92e-01	97.6%	91.0%
3692580	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.51	46.0	3.46e-01	100.0%	79.0%
4286470	5067.1.1.2 ↗	alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF	0.51	41.0	3.12e-01	100.0%	36.1%
3504862	160.1.1.0 ↗	alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase	0.51	39.0	3.74e-01	82.4%	92.0%
4994613	140.1.1.0 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	0.51	41.0	3.37e-01	89.4%	47.5%
3628662	3745.1.1.1 ↗	alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex	0.51	46.0	3.11e-01	100.0%	69.7%
4027638	4952.1.1.0 ↗	alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like	0.51	40.0	3.59e-01	95.3%	60.0%
3944811	191.1.1.44 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_43	0.50	36.0	3.27e-01	76.5%	85.8%
3909467	180.1.1.0 ↗	alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase	0.50	41.0	3.04e-01	90.6%	64.9%

D2 high residues 106-253

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp1591__YP_009120560__Pandoravirus_inopinatum__1605721__D181-198_210-259_277-315_339-420

D3 high residues 254-277_289-388

PDB

Domain cluster: rep: hypothetical_protein_pneo_cds_529__YP_009482139__Pandoravirus_neocaledonia__2107708__D177-292

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2xppA00	1.20.930.10	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.56	40.0	3.89e-01	74.2%	96.4%
5bp8A01	1.50.10.160	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.56	42.0	3.51e-01	79.8%	65.8%
4zudA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	47.0	3.68e-01	94.4%	96.5%
2jqqA00	1.20.58.1240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.53	40.0	3.78e-01	79.8%	98.1%
3vkgA10	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.50	35.0	3.02e-01	78.2%	44.4%
1t98A02	1.20.58.590	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain	0.50	35.0	3.19e-01	70.2%	93.9%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3925065	109.4.1.93 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF6_C	0.59	40.0	3.20e-01	70.2%	51.2%
3879249	109.4.1.1647 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28330	0.57	45.0	3.96e-01	84.7%	89.7%
3436235	4121.1.1.0 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like	0.56	39.0	3.45e-01	71.0%	74.4%
3897509	109.4.1.843 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EFR3_ARM	0.56	40.0	3.47e-01	74.2%	66.8%
3217251	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.55	39.0	3.37e-01	73.4%	57.4%
3936543	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	39.0	3.25e-01	77.4%	76.2%
3802510	109.4.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm	0.53	43.0	3.31e-01	89.5%	65.5%
3485423	1075.1.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane	0.52	45.0	3.56e-01	96.8%	44.1%
3571279	109.4.1.80 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3	0.51	37.0	3.59e-01	76.6%	86.2%
3240575	4266.2.1.0 ↗	alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like	0.51	38.0	3.81e-01	80.6%	76.8%

D4 high residues 410-528

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_228__YP_008436829__Pandoravirus_salinus__1349410__D350-478