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hypothetical_protein_TW95_gp0462
Euk-VirPandoravirus_inopinatum
hypothetical_protein_TW95_gp0462__YP_009119431__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009119431 ↗
- Protein ID:
- hypothetical_protein_TW95_gp0462
- Kingdom:
- euk
Quality
48.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 108-170
D2
medium
residues 171-310
D3
medium
residues 311-417
Domain cluster:
rep: F-box_domain_containing_protein__YP_009483259__Pandoravirus_quercus__2107709__D363-500
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19253.5 best | DUF5900 | 107.8 | 4.00e-31 | 86.9% | 100.0% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.58 | 43.0 | 3.91e-01 | 79.4% | 77.6% |
| 2v1lA00 | 3.10.450.430 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF2787 | 0.58 | 45.0 | 4.20e-01 | 81.3% | 72.9% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 42.0 | 3.12e-01 | 83.2% | 94.8% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.54 | 41.0 | 3.49e-01 | 83.2% | 84.3% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 34.0 | 3.81e-01 | 85.0% | 87.2% |
| 2kz0A01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.53 | 34.0 | 3.87e-01 | 94.4% | 95.8% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 38.0 | 3.36e-01 | 83.2% | 69.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023640 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.70 | 38.0 | 4.42e-01 | 85.0% | 73.4% |
| 3376285 | 706.1.1.4 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › BRX | 0.62 | 32.0 | 4.37e-01 | 90.7% | 100.0% |
| 2392667 | 9.11.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › Nm-ACP | 0.58 | 45.0 | 4.65e-01 | 83.2% | 93.2% |
| 3201100 | 316.1.1.63 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF7582 | 0.58 | 45.0 | 3.70e-01 | 98.1% | 45.0% |
| 3425526 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.55 | 43.0 | 3.66e-01 | 86.0% | 56.3% |
| 4371937 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.54 | 44.0 | 3.20e-01 | 90.7% | 91.3% |
| 3379143 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 45.0 | 3.45e-01 | 92.5% | 94.4% |
| 3232376 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.53 | 32.0 | 3.50e-01 | 83.2% | 74.1% |
| 3892131 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 46.0 | 3.31e-01 | 98.1% | 83.0% |
| 3829563 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.52 | 41.0 | 3.59e-01 | 86.0% | 58.2% |
| 3456597 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.51 | 41.0 | 3.61e-01 | 87.9% | 58.9% |
| 3510560 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 43.0 | 3.43e-01 | 96.3% | 95.8% |
| 3809272 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.51 | 46.0 | 3.34e-01 | 99.1% | 84.4% |
| 5018514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.59e-01 | 93.5% | 64.4% |