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hypothetical_protein_TW95_gp0525

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0525__YP_009119494__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119494 ↗
Protein ID:
hypothetical_protein_TW95_gp0525
Kingdom:
euk

Quality

71.5 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-141
PDB
Domain cluster: rep: IMGVR_UViG_3300025686_000590-3300025686-Ga0209506_100546313__D25-156
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.59 38.0 4.35e-01 88.2% 86.3%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.52 32.0 3.86e-01 75.7% 100.0%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 37.0 3.46e-01 77.2% 58.4%
2wjsA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 36.0 3.45e-01 85.3% 62.1%
1atnD00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.50 43.0 3.53e-01 94.1% 63.2%
3bvxA04 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.50 45.0 3.60e-01 100.0% 98.2%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3990496 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.63 28.0 3.88e-01 83.1% 81.4%
7038 850.1.1.2 ↗ a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 0.59 38.0 4.35e-01 88.2% 86.3%
3265841 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.59 33.0 3.84e-01 76.5% 76.0%
3925087 7026.1.1.0 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.58 51.0 4.09e-01 92.6% 60.8%
3237737 7026.1.1.0 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.56 53.0 3.20e-01 100.0% 29.5%
4437448 7026.1.1.5 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD 0.56 51.0 4.19e-01 97.8% 62.1%
4385455 7026.1.1.5 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD 0.55 50.0 4.40e-01 97.1% 70.6%
4018118 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.54 48.0 3.88e-01 98.5% 93.3%
4003952 3523.1.1.0 ↗ beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) 0.54 49.0 4.48e-01 100.0% 80.0%
3416435 7026.1.1.0 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.54 48.0 3.84e-01 96.3% 61.6%
3423522 7026.1.1.4 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › Chorein_N 0.53 47.0 3.71e-01 97.1% 71.6%
2641778 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.53 27.0 3.38e-01 77.2% 80.5%
3382839 7026.1.1.13 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › Hobbit 0.53 48.0 3.00e-01 97.1% 40.4%
3697524 9.2.1.7 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF30970 0.52 33.0 3.99e-01 84.6% 96.7%
3742647 7026.1.1.5 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD 0.52 46.0 3.46e-01 95.6% 54.1%
4506576 7026.1.1.5 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD 0.52 47.0 3.58e-01 100.0% 62.5%
3274430 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.52 45.0 3.93e-01 97.1% 97.6%
4141799 2003.1.5.213 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS, tRNA_U5-meth_tr 0.51 44.0 3.19e-01 91.2% 47.4%
5039993 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.51 44.0 3.91e-01 96.3% 90.2%
3867103 3417.1.1.1 ↗ a+b three layers › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › BRICHOS 0.51 36.0 4.00e-01 92.6% 93.3%
4527800 1033.1.1.3 ↗ beta duplicates or obligate multimers › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › TcdA_TcdB_pore, PF30720 0.51 44.0 2.74e-01 98.5% 17.6%
3703329 246.3.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.50 41.0 3.26e-01 89.0% 57.1%