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hypothetical_protein_TW95_gp0561

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0561__YP_009119530__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119530 ↗
Protein ID:
hypothetical_protein_TW95_gp0561
Kingdom:
euk

Quality

70.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-158
PDB
D2 high residues 174-320
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_365__YP_009481049__Pandoravirus_macleodensis__2107707__D185-292
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zt4C01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.71 44.0 4.11e-01 100.0% 50.8%
2o5nA02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.69 39.0 3.87e-01 100.0% 52.2%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.67 38.0 3.81e-01 100.0% 54.7%
3d2uE01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.67 44.0 4.05e-01 100.0% 52.1%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 29.0 3.86e-01 98.0% 82.9%
1jllB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 39.0 3.92e-01 100.0% 68.4%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 27.0 2.84e-01 82.3% 54.3%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 39.0 3.33e-01 77.6% 83.0%
1huxA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 39.0 4.27e-01 100.0% 98.3%
1zc6B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 36.0 3.74e-01 94.6% 76.6%
7d8gA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.51 36.0 3.49e-01 93.9% 63.5%
3exmA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.51 35.0 3.25e-01 93.9% 53.8%
3vv1A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 34.0 3.48e-01 100.0% 70.2%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3888428 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.70 37.0 4.59e-01 78.2% 82.2%
1140833 809.2.1.1 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like 0.67 26.0 3.60e-01 85.7% 69.9%
1144731 233.1.1.4 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › M157 0.59 35.0 3.48e-01 100.0% 55.0%
4031984 3894.1.1.1 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.58 27.0 2.91e-01 83.0% 51.2%
3278056 2484.2.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain 0.57 29.0 3.70e-01 86.4% 85.0%
2722572 3894.1.1.3 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.57 28.0 2.93e-01 83.0% 50.4%
223685 2484.1.1.21 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.54 34.0 4.10e-01 70.1% 96.8%
3509387 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 34.0 3.80e-01 100.0% 78.3%
4356530 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.54 36.0 3.33e-01 94.6% 53.0%
3506427 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.54 40.0 4.31e-01 81.6% 91.2%
4373611 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.53 38.0 3.59e-01 100.0% 61.7%
3234136 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 35.0 3.62e-01 100.0% 72.7%
3996209 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.50 36.0 3.62e-01 100.0% 72.0%
D3 high residues 329-438
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1558__YP_009120527__Pandoravirus_inopinatum__1605721__D202-300
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ajcA01 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.59 39.0 4.00e-01 75.5% 70.2%
3ut4A00 1.25.40.750 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Domain of unknown function DUF5071 0.53 38.0 3.63e-01 73.6% 67.2%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.53 37.0 3.55e-01 70.0% 80.8%
1t5oA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.53 43.0 4.03e-01 90.0% 96.5%
7ldgA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 38.0 3.10e-01 78.2% 59.1%
1ldjA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.51 35.0 3.47e-01 70.0% 88.7%
2vixA03 1.20.1280.240 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.51 39.0 3.90e-01 81.8% 81.4%
2i39B00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.51 44.0 4.36e-01 98.2% 94.1%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030331 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 44.0 3.51e-01 80.0% 52.6%
3676536 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.58 42.0 3.72e-01 77.3% 62.4%
3173959 109.4.1.357 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vac14_Fig4_bd 0.58 44.0 3.46e-01 80.0% 52.2%
3619582 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 43.0 3.28e-01 84.5% 53.1%
3712289 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 40.0 3.84e-01 75.5% 98.4%
3586043 109.27.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › PF26017 0.52 39.0 3.36e-01 78.2% 76.6%
4980128 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.51 42.0 3.90e-01 90.9% 89.3%
3397977 109.25.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A 0.51 38.0 3.79e-01 80.0% 80.0%
310229 5000.3.1.3 ↗ alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Poxv_Bcl-2-like 0.51 44.0 4.36e-01 98.2% 94.1%
4016501 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.50 43.0 2.94e-01 96.4% 53.9%