←Back to structures

hypothetical_protein_TW95_gp0604

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0604__YP_009119573__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119573 ↗
Protein ID:
hypothetical_protein_TW95_gp0604
Kingdom:
euk

Quality

62.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-80
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.68 48.0 4.44e-01 93.3% 58.5%
1paqA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 57.0 4.53e-01 97.3% 91.3%
1bc0A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.65 47.0 4.57e-01 78.7% 86.0%
2b6cA01 1.20.1660.10 Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) 0.65 52.0 4.59e-01 92.0% 71.6%
4evfA03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.64 48.0 4.73e-01 81.3% 93.8%
4hreA03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.63 47.0 4.52e-01 81.3% 85.1%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 53.0 4.35e-01 100.0% 70.9%
1te4A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 48.0 4.63e-01 93.3% 92.1%
4l7aA00 3.40.390.70 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › 0.59 50.0 3.46e-01 94.7% 31.4%
3ls1A00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.59 40.0 3.34e-01 70.7% 58.6%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.58 48.0 4.16e-01 96.0% 88.0%
5je8B02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.58 40.0 3.43e-01 73.3% 82.0%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.58 40.0 3.80e-01 72.0% 92.1%
3h38A02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.56 44.0 3.17e-01 93.3% 54.0%
3k53A02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 41.0 3.76e-01 85.3% 62.2%
3knwB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 45.0 3.56e-01 98.7% 97.2%
3n0aA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 44.0 3.34e-01 93.3% 61.3%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.50 35.0 2.90e-01 72.0% 58.9%
8e9gK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 35.0 3.25e-01 70.7% 78.0%
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.50 42.0 3.24e-01 96.0% 61.7%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3264205 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.78 69.0 5.31e-01 96.0% 54.4%
3690961 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 59.0 4.26e-01 97.3% 51.8%
3257372 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 59.0 4.01e-01 97.3% 40.4%
4191801 176.1.1.0 ↗ alpha arrays › Annexin › Annexin › Annexin 0.68 48.0 4.82e-01 74.7% 92.0%
4462190 109.4.1.1283 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_PBS, HEAT_2 0.66 57.0 4.02e-01 98.7% 57.2%
3483768 176.1.1.0 ↗ alpha arrays › Annexin › Annexin › Annexin 0.66 47.0 4.42e-01 74.7% 82.2%
1889998 109.4.1.1259 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2 0.66 57.0 4.92e-01 100.0% 81.1%
3505566 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 55.0 3.79e-01 94.7% 50.0%
4335799 176.1.1.0 ↗ alpha arrays › Annexin › Annexin › Annexin 0.64 47.0 4.66e-01 78.7% 92.5%
4955310 109.4.1.3612 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF389 0.64 47.0 3.36e-01 78.7% 67.0%
3451428 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.62 52.0 3.81e-01 100.0% 62.1%
3917007 3736.1.1.1 ↗ alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4_HD2 0.61 45.0 4.20e-01 78.7% 75.8%
3575928 176.1.1.1 ↗ alpha arrays › Annexin › Annexin › Annexin › Annexin 0.60 45.0 3.99e-01 80.0% 73.6%
4948940 3236.1.1.3 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Mem_trans 0.60 41.0 2.73e-01 70.7% 51.3%
1068682 2498.1.1.47 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_Mx1 0.59 50.0 3.46e-01 94.7% 31.4%
387652 601.18.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › PsbQ 0.59 40.0 3.34e-01 70.7% 58.6%
3996268 109.4.1.869 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INT1_R3 0.59 48.0 3.90e-01 94.7% 70.3%
3258094 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.58 50.0 3.29e-01 96.0% 25.8%
1549024 627.1.1.1 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 0.57 46.0 3.64e-01 90.7% 59.5%
3313770 6155.1.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.57 42.0 3.52e-01 80.0% 77.8%
3360681 6155.1.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.56 41.0 3.48e-01 80.0% 67.4%
4955304 3236.1.1.3 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Mem_trans 0.52 43.0 2.98e-01 96.0% 78.0%