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hypothetical_protein_TW95_gp0617

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0617__YP_009119586__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119586 ↗
Protein ID:
hypothetical_protein_TW95_gp0617
Kingdom:
euk

Quality

73.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-56
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1675__YP_009120644__Pandoravirus_inopinatum__1605721__D292-355
D2 high residues 66-133
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3deoA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 64.0 5.06e-01 100.0% 71.2%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 60.0 4.76e-01 100.0% 68.7%
4jgiA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.70 50.0 4.79e-01 76.5% 93.8%
4c9bB00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 56.0 3.81e-01 100.0% 35.0%
3h5qA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.62 44.0 4.37e-01 75.0% 85.7%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.60 48.0 4.04e-01 91.2% 53.6%
1m9iA01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.60 43.0 4.14e-01 77.9% 86.3%
4gtnA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.60 42.0 4.12e-01 75.0% 85.1%
3ha4B00 1.20.58.690 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 47.0 4.01e-01 92.6% 76.7%
4ga6A02 1.20.970.50 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › 0.58 49.0 3.93e-01 100.0% 83.6%
1dgfA03 1.20.1370.60 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › 0.58 47.0 4.04e-01 92.6% 100.0%
1n00A01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.58 42.0 3.97e-01 79.4% 91.7%
3v5uA02 1.20.1420.30 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › NCX, central ion-binding region 0.57 43.0 3.11e-01 83.8% 79.2%
4xk2B00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.57 46.0 3.09e-01 94.1% 28.2%
3zliA02 1.20.58.1370 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 43.0 4.10e-01 85.3% 98.8%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 45.0 3.63e-01 100.0% 54.3%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 35.0 3.00e-01 70.6% 61.7%
4ga4A01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.53 39.0 3.95e-01 80.9% 100.0%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 30.0 3.03e-01 85.3% 55.7%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 37.0 3.09e-01 76.5% 63.6%
3g7rA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 43.0 3.30e-01 100.0% 79.9%
2b6cA01 1.20.1660.10 Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) 0.52 43.0 3.77e-01 100.0% 99.1%
1uouA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.51 40.0 4.07e-01 88.2% 97.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3198211 109.3.1.347 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_KRIT1 0.72 64.0 4.01e-01 100.0% 33.6%
3695738 109.3.1.232 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 0.71 62.0 3.84e-01 100.0% 28.9%
3645713 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 61.0 4.87e-01 100.0% 59.3%
4542889 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.70 61.0 4.15e-01 100.0% 28.0%
3264205 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 60.0 4.61e-01 100.0% 71.2%
3460081 109.4.1.1374 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_24 0.68 59.0 4.46e-01 100.0% 50.0%
3815515 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.66 56.0 4.09e-01 98.5% 39.0%
3265998 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 56.0 4.08e-01 98.5% 45.9%
3276358 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.64 54.0 3.40e-01 100.0% 24.1%
3914708 109.4.1.25 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DIL 0.63 53.0 3.37e-01 100.0% 31.6%
3408275 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 52.0 3.75e-01 100.0% 52.2%
3274289 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 46.0 3.50e-01 85.3% 39.4%
4256018 604.12.1.5 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SUV3_C 0.59 40.0 3.78e-01 70.6% 84.7%
3170253 632.3.1.11 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › SUV3_C 0.59 40.0 3.92e-01 70.6% 100.0%
3177112 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.56 41.0 2.90e-01 79.4% 43.6%
3780964 377.1.1.43 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › KDM6_C-hel 0.53 37.0 3.42e-01 76.5% 84.2%
3685911 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 46.0 4.16e-01 100.0% 90.5%
3914685 6171.1.1.2 ↗ alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › KDM6_C-hel 0.53 37.0 3.41e-01 76.5% 84.2%
3821754 509.1.1.10 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › HHD_RTEL1 0.51 38.0 3.65e-01 80.9% 93.8%