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hypothetical_protein_TW95_gp0624

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0624__YP_009119593__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119593 ↗
Protein ID:
hypothetical_protein_TW95_gp0624
Kingdom:
euk

Quality

49.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-53
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00646.39 best F-box 21.2 2.90e-04 60.4% 69.8%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.86 63.0 6.69e-01 79.2% 95.7%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.84 67.0 4.17e-01 88.7% 17.4%
1oyzA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.84 60.0 3.72e-01 75.5% 15.0%
3ogkB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.81 54.0 5.99e-01 71.7% 90.2%
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.79 63.0 5.38e-01 88.7% 58.6%
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.77 56.0 6.06e-01 79.2% 97.6%
4c0dC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.76 55.0 3.97e-01 77.4% 31.0%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.76 61.0 5.00e-01 90.6% 55.0%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.75 55.0 5.41e-01 79.2% 96.5%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.74 64.0 5.23e-01 98.1% 75.8%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.74 61.0 4.21e-01 88.7% 35.5%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 62.0 5.23e-01 100.0% 80.7%
2e31A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 59.0 5.67e-01 96.2% 83.9%
3ilxA02 1.10.287.2170 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 40.0 4.34e-01 98.1% 68.2%
1v66A00 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.63 41.0 3.88e-01 77.4% 55.4%
2ijeS00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.60 47.0 3.14e-01 90.6% 96.6%
1or7C00 1.10.10.880 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Anti sigma-E protein RseA, N-terminal domain 0.60 45.0 4.21e-01 83.0% 68.2%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 52.0 3.74e-01 100.0% 61.5%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.59 46.0 3.70e-01 90.6% 48.3%
2dflA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.58 42.0 4.15e-01 81.1% 85.0%
1keaA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.58 46.0 3.79e-01 96.2% 71.7%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 2.79e-01 90.6% 60.7%
2aswA00 1.10.8.500 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase 0.56 44.0 4.37e-01 92.5% 92.9%
6ruiB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.56 43.0 3.09e-01 90.6% 63.2%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 38.0 3.71e-01 79.2% 100.0%
3nuwA02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.54 40.0 2.82e-01 83.0% 39.5%
1whuA00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.51 40.0 3.30e-01 88.7% 82.7%
1ciiA03 1.10.490.30 Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin 0.51 41.0 2.96e-01 90.6% 97.5%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3212367 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.92 66.0 7.52e-01 79.2% 100.0%
3341479 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.92 72.0 6.50e-01 86.8% 62.9%
3349711 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 66.0 7.11e-01 75.5% 91.1%
3191984 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 65.0 5.16e-01 75.5% 40.0%
3219180 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.91 65.0 7.38e-01 79.2% 100.0%
3211847 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 72.0 7.80e-01 94.3% 100.0%
3998412 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.90 65.0 7.30e-01 81.1% 100.0%
3635440 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 70.0 7.27e-01 88.7% 88.0%
3731257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 64.0 7.15e-01 75.5% 100.0%
3189379 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 73.0 6.82e-01 88.7% 84.6%
3781933 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 63.0 7.08e-01 73.6% 97.5%
3217628 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 63.0 7.01e-01 75.5% 100.0%
3687689 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.87 75.0 4.46e-01 92.5% 28.8%
4017103 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.87 71.0 4.17e-01 86.8% 38.9%
3227830 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 61.0 6.87e-01 79.2% 100.0%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 66.0 6.21e-01 88.7% 69.2%
3189161 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.85 72.0 4.14e-01 90.6% 16.6%
3244730 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 64.0 6.81e-01 88.7% 95.6%
3724474 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.84 71.0 4.05e-01 90.6% 20.4%
3688419 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 60.0 6.63e-01 77.4% 100.0%
3239855 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 64.0 6.85e-01 88.7% 95.6%
3301272 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 70.0 5.40e-01 90.6% 46.4%
3215203 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 59.0 6.59e-01 79.2% 100.0%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 60.0 6.40e-01 79.2% 91.1%
3171073 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 74.0 5.72e-01 100.0% 48.7%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 69.0 5.98e-01 90.6% 69.2%
3653326 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 63.0 6.75e-01 83.0% 100.0%
3672250 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.82 65.0 4.38e-01 86.8% 41.1%
3730967 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 69.0 5.45e-01 92.5% 48.6%
3422328 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 68.0 5.74e-01 90.6% 60.0%
3655969 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 61.0 5.69e-01 86.8% 64.6%
3443639 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 66.0 6.81e-01 88.7% 98.0%
3339367 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 67.0 6.94e-01 92.5% 95.9%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 68.0 5.85e-01 90.6% 63.7%
3440863 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 59.0 6.56e-01 77.4% 100.0%
3491937 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 68.0 5.69e-01 92.5% 56.7%
3886321 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 65.0 5.61e-01 86.8% 60.0%
3301911 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 67.0 5.67e-01 90.6% 60.0%
3460335 207.1.1.172 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD, LRR_At5g56370 0.81 69.0 3.98e-01 92.5% 23.5%
3363836 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 67.0 5.66e-01 90.6% 60.0%
3477761 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 66.0 5.64e-01 90.6% 63.5%
4022899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 68.0 5.45e-01 92.5% 51.0%
3344543 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 67.0 5.73e-01 92.5% 60.0%
3680688 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.80 67.0 3.87e-01 90.6% 21.4%
3552610 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 5.92e-01 90.6% 68.9%
3803880 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.80 67.0 3.96e-01 92.5% 35.8%
3691218 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 64.0 6.39e-01 86.8% 85.5%
3628631 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 59.0 5.70e-01 84.9% 70.0%
3686935 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 64.0 5.08e-01 86.8% 45.0%
3821430 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 67.0 5.75e-01 90.6% 67.5%
3485475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 65.0 5.57e-01 90.6% 60.0%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 5.59e-01 90.6% 61.2%
4073598 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 67.0 6.26e-01 92.5% 83.1%
3191118 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 65.0 5.21e-01 92.5% 46.6%
3740971 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 66.0 5.61e-01 92.5% 61.2%
3795292 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 56.0 6.19e-01 75.5% 100.0%
3261282 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 68.0 6.73e-01 94.3% 94.5%
3188576 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 70.0 5.86e-01 96.2% 72.9%
3299128 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 64.0 5.19e-01 90.6% 53.0%
3730054 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 68.0 6.14e-01 94.3% 72.9%
3276040 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 64.0 5.88e-01 90.6% 71.4%
4002233 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.78 63.0 3.62e-01 88.7% 17.2%
3230376 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.78 65.0 3.74e-01 92.5% 22.1%
3439461 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 63.0 5.91e-01 88.7% 75.4%
3903968 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 67.0 6.00e-01 96.2% 69.3%
3301883 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 67.0 5.82e-01 96.2% 67.5%
4022140 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.77 66.0 3.75e-01 92.5% 97.9%
3195357 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.77 66.0 3.89e-01 96.2% 20.1%
3738910 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 62.0 5.28e-01 88.7% 84.7%
3323668 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 62.0 5.53e-01 88.7% 64.0%
3837673 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 57.0 6.06e-01 79.2% 97.8%
3407033 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 66.0 5.90e-01 96.2% 70.7%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 64.0 5.55e-01 92.5% 61.3%
3507975 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 62.0 3.84e-01 90.6% 18.1%
None — 0.77 64.0 3.69e-01 92.5% 28.1%
3802856 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 64.0 6.37e-01 92.5% 90.9%
3742900 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 62.0 4.61e-01 90.6% 39.3%
3247452 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 56.0 6.02e-01 79.2% 93.3%
3355293 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 63.0 5.09e-01 92.5% 50.0%
3385347 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 63.0 5.54e-01 92.5% 64.6%
3259075 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 66.0 5.78e-01 96.2% 80.8%
3646855 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 58.0 6.16e-01 92.5% 97.8%
3861026 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 66.0 5.32e-01 96.2% 53.1%
3228728 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 53.0 5.91e-01 77.4% 100.0%
4593317 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 62.0 5.97e-01 92.5% 88.3%
3209791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 59.0 5.59e-01 90.6% 80.0%
3833527 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 58.0 5.63e-01 88.7% 80.0%
3726236 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 59.0 5.05e-01 88.7% 68.2%
3223791 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 63.0 6.05e-01 96.2% 93.3%
3743076 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 62.0 5.09e-01 94.3% 54.7%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 65.0 5.87e-01 98.1% 78.6%
3230101 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 57.0 3.98e-01 86.8% 40.0%
3781279 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 61.0 5.31e-01 96.2% 65.0%
4019682 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 60.0 5.00e-01 96.2% 75.8%
3491877 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 57.0 4.03e-01 92.5% 33.1%
3259869 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 58.0 4.98e-01 92.5% 61.2%
3256545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 59.0 5.57e-01 96.2% 92.3%