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hypothetical_protein_TW95_gp0663

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0663__YP_009119632__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119632 ↗
Protein ID:
hypothetical_protein_TW95_gp0663
Kingdom:
euk

Quality

57.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (18 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-86
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_746__YP_009483437__Pandoravirus_quercus__2107709__D17-84
D2 medium residues 92-146
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 43.0 3.76e-01 100.0% 38.3%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.74 63.0 6.39e-01 94.5% 100.0%
7e4mA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.61 53.0 3.46e-01 100.0% 41.4%
4hfvA02 6.10.280.170 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Substrate of the Dot/Icm secretion system 0.60 40.0 3.70e-01 70.9% 78.9%
1bccH00 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.59 42.0 3.93e-01 74.5% 65.2%
2vzcB00 1.10.418.10 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain 0.57 48.0 3.73e-01 94.5% 89.7%
2f22A00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.57 45.0 3.56e-01 98.2% 46.5%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.56 46.0 3.97e-01 100.0% 77.9%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.54 39.0 3.60e-01 74.5% 61.2%
2xi9A03 1.10.150.480 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.54 43.0 3.62e-01 90.9% 76.2%
7jpxA02 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.53 48.0 3.69e-01 100.0% 68.6%
6xasW01 3.90.940.10 Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega 0.53 40.0 4.19e-01 89.1% 91.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3858699 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.73 65.0 5.28e-01 98.2% 59.0%
3514804 3722.1.1.0 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain 0.71 60.0 3.95e-01 98.2% 23.7%
3277726 620.1.1.5 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › MDMPI_N 0.69 59.0 4.43e-01 96.4% 48.9%
3284560 3016.1.1.19 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › KYNU_C 0.66 48.0 4.10e-01 92.7% 47.8%
3756624 5.1.4.55 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ELYS-bb 0.62 44.0 2.57e-01 89.1% 7.8%
2075035 3787.2.1.0 ↗ alpha bundles › HAD superfamily helical bundle insertion domain 0.58 48.0 3.41e-01 100.0% 46.4%
3530265 3755.3.1.533 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF28769 0.57 48.0 3.46e-01 100.0% 31.5%
3355320 3525.1.1.1 ↗ alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET 0.56 46.0 4.15e-01 96.4% 88.7%
3212929 3525.1.1.1 ↗ alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET 0.54 43.0 4.12e-01 98.2% 98.6%
3413023 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 44.0 3.28e-01 100.0% 37.1%
439020 2484.1.1.75 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L5e 0.50 43.0 3.36e-01 92.7% 46.0%
D3 medium residues 147-163_177-312_328-367
PDB