←Back to structures

hypothetical_protein_TW95_gp0901

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp0901__YP_009119870__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009119870 ↗
Protein ID:
hypothetical_protein_TW95_gp0901
Kingdom:
euk

Quality

69.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-109
PDB
D2 medium residues 110-165
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 49.0 3.07e-01 96.4% 12.7%
2k2dA00 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.69 45.0 4.83e-01 91.1% 80.9%
3doaA03 3.40.970.40 Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › fibrinogen binding protein from staphylococcus aureus domain like 0.67 39.0 4.33e-01 98.2% 74.4%
5owvD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 50.0 3.32e-01 100.0% 20.7%
2w3sA04 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.66 46.0 3.69e-01 100.0% 36.8%
3vk6A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 46.0 4.55e-01 96.4% 72.9%
2j9uB00 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.64 49.0 5.25e-01 89.3% 100.0%
4pofA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.62 48.0 5.06e-01 98.2% 98.0%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.62 48.0 5.01e-01 98.2% 98.0%
4r7rA00 3.30.1490.410 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 0.60 43.0 3.46e-01 78.6% 85.2%
4mloA01 2.60.120.810 Mainly Beta › Sandwich › Jelly Rolls › 0.58 42.0 3.15e-01 80.4% 69.2%
2hg6A00 3.90.1650.10 Alpha Beta › Alpha-Beta Complex › PA1123-like › PA1123-like 0.56 38.0 3.15e-01 100.0% 37.7%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.54 44.0 4.24e-01 92.9% 90.6%
8h68A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.52 45.0 3.05e-01 100.0% 85.0%
2v1yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 43.0 3.74e-01 94.6% 91.0%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.41e-01 100.0% 54.7%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4933437 101.1.9.83 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM 0.85 57.0 4.51e-01 94.6% 36.1%
4241460 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.74 53.0 3.97e-01 96.4% 31.9%
3704895 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 48.0 5.42e-01 89.3% 97.4%
4945780 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 48.0 5.45e-01 85.7% 97.5%
3604642 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 52.0 5.68e-01 96.4% 97.8%
4976096 2003.1.5.19 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.71 51.0 3.11e-01 96.4% 11.3%
4982450 301.9.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA 0.69 55.0 4.27e-01 100.0% 40.0%
3898196 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 57.0 5.79e-01 91.1% 96.4%
4946681 2003.1.5.19 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.68 48.0 2.93e-01 96.4% 10.8%
4941241 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 53.0 5.53e-01 100.0% 96.0%
4971492 2003.1.5.19 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.67 47.0 2.85e-01 96.4% 10.2%
4956457 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 51.0 5.32e-01 100.0% 96.0%
4962623 375.1.1.339 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7560 0.65 48.0 5.25e-01 94.6% 100.0%
5022651 375.11.1.0 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ 0.64 45.0 4.24e-01 100.0% 60.0%
4189117 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 50.0 5.25e-01 98.2% 96.0%
4971396 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 51.0 5.14e-01 100.0% 94.5%
3594031 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 48.0 4.92e-01 100.0% 92.7%
4991294 375.1.1.58 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB 0.59 47.0 4.88e-01 96.4% 98.0%
4505111 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 49.0 5.01e-01 100.0% 100.0%
5022231 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 51.0 3.96e-01 100.0% 61.6%
3209518 376.1.1.124 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › DUF7101 0.56 48.0 4.03e-01 100.0% 81.0%
3781930 375.1.1.58 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB 0.56 49.0 4.68e-01 100.0% 96.9%
1683816 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 48.0 4.81e-01 100.0% 98.2%
5075702 4050.1.1.0 ↗ few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz 0.54 44.0 4.49e-01 91.1% 94.5%
3630024 2003.1.4.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 0.53 42.0 2.66e-01 91.1% 20.6%
5039411 375.1.1.12 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e 0.53 45.0 4.34e-01 96.4% 84.4%
3184022 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.51 43.0 3.37e-01 96.4% 60.0%
3231588 382.1.1.6 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR 0.51 41.0 3.88e-01 100.0% 90.4%
4588442 7591.1.1.1 ↗ a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK 0.50 39.0 3.21e-01 94.6% 99.2%