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hypothetical_protein_TW95_gp1045

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp1045__YP_009120014__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009120014 ↗
Protein ID:
hypothetical_protein_TW95_gp1045
Kingdom:
euk

Quality

73.2 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 415-517_550-570
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_542__YP_009481226__Pandoravirus_macleodensis__2107707__D444-522_546-569
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.69 43.0 4.56e-01 96.8% 69.6%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.66 42.0 4.57e-01 98.4% 77.2%
7xcnM01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.65 41.0 4.93e-01 91.9% 100.0%
3ezxA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.63 41.0 4.75e-01 94.4% 95.3%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 36.0 3.49e-01 92.7% 52.6%
1werA01 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.59 49.0 4.43e-01 91.1% 96.0%
5nnpE01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 48.0 3.24e-01 88.7% 37.6%
2wwxB00 1.20.1260.70 Mainly Alpha › Up-down Bundle › Ferritin › 0.58 45.0 3.85e-01 96.8% 51.0%
1dvpA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 42.0 4.04e-01 100.0% 67.1%
3bgeA01 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.55 39.0 4.31e-01 75.8% 96.9%
1pbgA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 46.0 3.24e-01 98.4% 71.6%
2lf3A00 1.20.1280.220 Mainly Alpha › Up-down Bundle › Monooxygenase › Effector protein HopAB, BAK1-interacting domain 0.53 32.0 3.41e-01 91.1% 67.6%
5ojcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 37.0 3.52e-01 93.5% 59.1%
1m57A00 1.20.210.10 Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain 0.52 42.0 2.77e-01 87.1% 53.6%
5tj3A01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.51 41.0 2.89e-01 85.5% 45.7%
4u04B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 32.0 3.72e-01 74.2% 87.5%
2nq2A00 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.51 41.0 3.13e-01 87.9% 50.6%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3279151 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.70 47.0 5.45e-01 94.4% 94.4%
4332068 109.4.1.758 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med26 0.66 44.0 4.06e-01 100.0% 51.5%
5002850 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.65 44.0 4.98e-01 96.8% 91.6%
4975359 4995.1.1.0 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like 0.64 42.0 4.92e-01 92.7% 97.6%
4487472 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.63 41.0 4.09e-01 91.9% 62.3%
3839761 138.1.1.0 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.59 43.0 4.61e-01 75.8% 92.7%
3410786 109.4.1.89 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Drf_FH3,Drf_GBD 0.59 48.0 3.26e-01 100.0% 23.5%
3417533 109.4.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G 0.57 44.0 3.77e-01 100.0% 50.5%
3673426 109.4.1.1279 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.56 45.0 3.02e-01 88.7% 22.1%
5034776 138.1.1.4 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › MgsA_C 0.54 40.0 3.54e-01 79.8% 51.9%
4946407 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 43.0 2.92e-01 89.5% 44.7%
3736928 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.52 39.0 3.90e-01 83.9% 76.0%
4943582 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 3.78e-01 96.8% 56.9%
3901310 109.4.1.819 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec8_C 0.52 47.0 2.92e-01 100.0% 24.8%
4957689 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.52 37.0 3.69e-01 73.4% 96.9%
3549734 109.4.1.15 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS 0.52 45.0 4.22e-01 95.2% 80.0%
3201472 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 3.15e-01 94.4% 71.6%
5065519 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 43.0 4.40e-01 95.2% 100.0%
3598617 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 42.0 3.21e-01 92.7% 77.8%
D2 medium residues 571-622
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_901__YP_008319801__Pandoravirus_dulcis__1349409__D646-695