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hypothetical_protein_TW95_gp1350

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp1350__YP_009120319__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009120319 ↗
Protein ID:
hypothetical_protein_TW95_gp1350
Kingdom:
euk

Quality

65.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 105-155
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pe3A00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.70 59.0 3.61e-01 96.1% 76.5%
1vs5O00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.67 46.0 3.97e-01 74.5% 93.2%
2o36A01 1.20.1050.40 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Endopeptidase. Chain P; domain 1 0.67 53.0 4.13e-01 96.1% 70.3%
1e8yA03 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.67 56.0 3.83e-01 96.1% 31.7%
1f7uA02 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.66 51.0 3.84e-01 84.3% 63.2%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.66 44.0 4.20e-01 70.6% 100.0%
4mcoA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.65 55.0 3.38e-01 96.1% 75.9%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.61 45.0 3.78e-01 82.4% 56.4%
1b4pA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 42.0 3.51e-01 78.4% 70.5%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.60 47.0 3.66e-01 92.2% 56.3%
3tp3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 49.0 3.58e-01 96.1% 55.4%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.58 43.0 3.95e-01 82.4% 76.1%
2aw6A02 1.25.40.400 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 45.0 3.10e-01 96.1% 43.4%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 39.0 3.22e-01 72.5% 40.8%
3wvoC02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.55 45.0 3.47e-01 98.0% 69.2%
1iuqA01 1.10.1200.50 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal 0.51 39.0 3.56e-01 96.1% 59.2%
1f2eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 38.0 3.16e-01 88.2% 72.6%
1bhaA00 1.10.287.170 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 33.0 3.02e-01 86.3% 52.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3688846 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.89 65.0 7.23e-01 78.4% 100.0%
3209617 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.82 70.0 4.13e-01 94.1% 20.3%
3304693 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 66.0 6.89e-01 90.2% 100.0%
4524872 207.1.1.224 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF29466, PF29477 0.81 71.0 4.24e-01 100.0% 21.6%
3234151 207.1.1.127 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PHA-1 0.81 68.0 4.01e-01 98.0% 12.7%
3729229 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.79 70.0 4.34e-01 100.0% 32.6%
3709592 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 64.0 6.08e-01 96.1% 76.7%
3315483 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 63.0 6.00e-01 92.2% 76.7%
3677341 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 65.0 4.47e-01 98.0% 44.6%
3666814 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 62.0 6.09e-01 92.2% 89.1%
3329358 145.1.1.26 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › LRR_6, DUF7885 0.72 57.0 3.45e-01 90.2% 12.3%
3302084 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 48.0 4.02e-01 74.5% 50.5%
3839049 616.1.1.1 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 0.65 48.0 4.06e-01 82.4% 93.3%
3703494 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 52.0 4.15e-01 100.0% 81.8%
3724838 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.60 40.0 3.71e-01 70.6% 67.1%
3508961 109.54.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.57 47.0 3.86e-01 96.1% 62.0%
4469646 4246.1.1.2 ↗ a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 0.57 41.0 2.52e-01 76.5% 26.5%
3679873 109.4.1.90 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TOM20_plant 0.57 46.0 3.40e-01 98.0% 55.8%
3375952 6155.1.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.57 48.0 3.51e-01 100.0% 56.7%
3524427 604.1.1.113 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SYNE3 0.56 47.0 3.83e-01 100.0% 82.9%
4964740 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 40.0 2.95e-01 88.2% 81.1%
None — 0.52 35.0 2.99e-01 74.5% 42.0%
4963862 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.51 34.0 3.40e-01 70.6% 65.5%
4067599 192.17.1.22 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › COX3 0.51 37.0 3.33e-01 84.3% 100.0%
3715687 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.50 40.0 2.60e-01 92.2% 68.9%
D2 medium residues 156-249
PDB
Domain cluster: rep: NR_DBD_like_superfamily_incomplete_domain__YP_008436637__Pandoravirus_salinus__1349410__D82-160
D3 medium residues 250-405
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_357__YP_008437077__Pandoravirus_salinus__1349410__D224-353