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hypothetical_protein_TW95_gp1353

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp1353__YP_009120322__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009120322 ↗
Protein ID:
hypothetical_protein_TW95_gp1353
Kingdom:
euk

Quality

74.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-121
PDB
Domain cluster: rep: kelch-containing_protein__YP_010085636__Akhmeta_virus__2200830__D2-108
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4uyiA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.79 63.0 6.18e-01 100.0% 78.7%
1a68A00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.72 50.0 5.71e-01 90.8% 96.6%
2a8pA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 44.0 3.80e-01 80.7% 63.5%
3f6aA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 42.0 3.89e-01 81.5% 78.7%
1d2iA00 3.40.91.20 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.50 35.0 2.92e-01 70.6% 74.3%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3645459 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.83 65.0 6.42e-01 100.0% 78.2%
3395811 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.77 67.0 6.46e-01 100.0% 83.1%
3628776 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.77 70.0 6.62e-01 100.0% 82.9%
3669972 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.76 64.0 6.31e-01 100.0% 84.0%
3394139 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.72 61.0 5.99e-01 100.0% 84.0%
4011952 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.72 59.0 5.96e-01 100.0% 86.7%
3184063 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.67 62.0 5.41e-01 100.0% 81.7%
3642829 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.66 62.0 4.96e-01 100.0% 60.9%
3192890 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.66 56.0 5.37e-01 89.9% 90.4%
3244180 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.65 56.0 4.69e-01 100.0% 55.0%
3199655 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.65 61.0 5.13e-01 100.0% 64.7%
3383067 226.1.1.11 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB+DUF3420 0.65 61.0 4.81e-01 100.0% 58.7%
3574767 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.64 55.0 4.60e-01 90.8% 58.5%
3787071 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.63 58.0 5.48e-01 100.0% 97.9%
3726958 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.61 57.0 4.90e-01 100.0% 66.1%
3188818 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.60 54.0 5.16e-01 95.0% 88.9%
4031313 221.4.1.9 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.55 41.0 4.16e-01 82.4% 76.7%
3599799 221.4.1.21 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › PF30669 0.55 42.0 3.51e-01 81.5% 78.1%
5038614 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.53 40.0 3.95e-01 81.5% 79.2%
3226300 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.52 39.0 3.65e-01 80.7% 62.7%
3719464 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.52 41.0 4.08e-01 84.9% 87.2%
3506352 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.52 39.0 3.70e-01 80.7% 67.1%
D2 medium residues 146-222
PDB
Domain cluster: rep: BTB_domain__YP_008437048__Pandoravirus_salinus__1349410__D181-239
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gq2A01 3.40.50.10380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Malic enzyme, N-terminal domain 0.62 48.0 3.40e-01 85.7% 71.4%
1sy7A02 1.20.1370.20 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain 0.62 43.0 4.59e-01 72.7% 85.9%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 40.0 2.93e-01 70.1% 78.3%
6humG01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.59 41.0 3.20e-01 72.7% 39.4%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 40.0 2.86e-01 72.7% 38.8%
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.55 29.0 3.02e-01 85.7% 50.7%
4u5qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 2.97e-01 100.0% 62.4%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 42.0 3.35e-01 93.5% 42.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974219 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 43.0 2.98e-01 72.7% 58.5%
5018583 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.61 41.0 2.76e-01 70.1% 60.0%
3414755 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 49.0 3.16e-01 100.0% 34.6%
5037891 2002.1.1.112 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_114 0.51 44.0 3.03e-01 100.0% 42.8%
3925273 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.50 28.0 2.47e-01 76.6% 35.0%
D3 medium residues 223-284
PDB