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hypothetical_protein_TW95_gp1365
Euk-VirPandoravirus_inopinatum
hypothetical_protein_TW95_gp1365__YP_009120334__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009120334 ↗
- Protein ID:
- hypothetical_protein_TW95_gp1365
- Kingdom:
- euk
Quality
72.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 95-243
D2
medium
residues 45-94
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2db0B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.79 | 58.0 | 3.65e-01 | 78.0% | 21.7% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 54.0 | 5.02e-01 | 74.0% | 66.1% |
| 2ccyA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.74 | 51.0 | 3.86e-01 | 74.0% | 32.3% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.73 | 53.0 | 3.12e-01 | 78.0% | 29.5% |
| 1n2aA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 53.0 | 4.20e-01 | 80.0% | 74.5% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.72 | 53.0 | 4.21e-01 | 80.0% | 50.5% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 51.0 | 3.74e-01 | 78.0% | 30.6% |
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.71 | 50.0 | 5.13e-01 | 74.0% | 89.1% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 60.0 | 4.48e-01 | 100.0% | 58.1% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.71 | 49.0 | 4.95e-01 | 80.0% | 73.5% |
| 1k90B03 | 1.20.140.60 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.70 | 53.0 | 4.10e-01 | 84.0% | 89.6% |
| 2va8A03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.68 | 54.0 | 3.49e-01 | 86.0% | 39.2% |
| 3lqhA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.68 | 56.0 | 4.49e-01 | 96.0% | 72.6% |
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.67 | 46.0 | 3.67e-01 | 72.0% | 35.0% |
| 1blwC00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.67 | 51.0 | 3.70e-01 | 84.0% | 71.6% |
| 2aj4B03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.66 | 48.0 | 3.38e-01 | 78.0% | 35.2% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 50.0 | 4.54e-01 | 84.0% | 100.0% |
| 4qnsA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.64 | 47.0 | 3.87e-01 | 86.0% | 80.2% |
| 2e31A01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.63 | 48.0 | 4.52e-01 | 86.0% | 77.4% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.62 | 46.0 | 4.66e-01 | 90.0% | 78.4% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 47.0 | 3.75e-01 | 86.0% | 70.7% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.58 | 47.0 | 4.08e-01 | 90.0% | 57.9% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 43.0 | 3.81e-01 | 84.0% | 70.3% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3582116 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.77 | 62.0 | 4.70e-01 | 90.0% | 94.2% |
| 4213046 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.76 | 54.0 | 4.98e-01 | 76.0% | 64.6% |
| 3646011 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.76 | 55.0 | 4.85e-01 | 76.0% | 60.0% |
| 3714091 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.76 | 52.0 | 4.61e-01 | 74.0% | 50.7% |
| 4202466 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.75 | 52.0 | 5.41e-01 | 72.0% | 84.4% |
| 3494904 | 7023.1.1.0 ↗ | alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein | 0.74 | 54.0 | 3.99e-01 | 78.0% | 37.6% |
| 4000502 | 192.8.1.305 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › VPS18_RING_C | 0.74 | 54.0 | 4.22e-01 | 80.0% | 41.8% |
| 1807269 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.73 | 51.0 | 5.20e-01 | 74.0% | 85.4% |
| 4485576 | 1.1.17.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 | 0.73 | 56.0 | 3.45e-01 | 84.0% | 41.4% |
| 4956224 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.73 | 54.0 | 3.45e-01 | 80.0% | 36.2% |
| 3832585 | 109.4.1.1185 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTB-POZ_ANK-like | 0.72 | 63.0 | 4.10e-01 | 100.0% | 51.7% |
| 4959101 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.72 | 52.0 | 3.32e-01 | 78.0% | 34.3% |
| 4951260 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.71 | 55.0 | 3.94e-01 | 82.0% | 40.7% |
| 4970593 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.71 | 53.0 | 3.34e-01 | 80.0% | 34.4% |
| 3517579 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.66 | 46.0 | 3.97e-01 | 74.0% | 46.3% |
| 4823831 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.66 | 46.0 | 3.56e-01 | 74.0% | 34.3% |
| 4565383 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.65 | 47.0 | 4.70e-01 | 80.0% | 78.0% |
| 4544002 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.65 | 46.0 | 4.64e-01 | 78.0% | 76.0% |
| 4809777 | 6004.1.1.2 ↗ | extended segments › FATC domain › FATC domain › FATC domain › ETC_C1_NDUFA5 | 0.64 | 46.0 | 3.56e-01 | 76.0% | 34.9% |
| 4027054 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.62 | 46.0 | 3.61e-01 | 76.0% | 68.0% |
| 3422328 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.62 | 50.0 | 4.37e-01 | 98.0% | 88.2% |
| 3491937 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.61 | 50.0 | 4.26e-01 | 98.0% | 71.1% |