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hypothetical_protein_TW95_gp1424

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp1424__YP_009120393__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009120393 ↗
Protein ID:
hypothetical_protein_TW95_gp1424
Kingdom:
euk

Quality

49.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-147
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.69 29.0 3.97e-01 92.1% 76.9%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.64 42.0 4.75e-01 84.2% 100.0%
3ufbA01 1.20.1260.30 Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain 0.62 44.0 3.51e-01 75.0% 89.3%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 49.0 4.78e-01 88.2% 96.4%
4xaaA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.60 46.0 3.36e-01 82.9% 86.4%
3hryA01 3.40.1620.10 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain 0.60 33.0 3.91e-01 84.2% 81.6%
5yixA00 1.10.601.10 Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor 0.59 52.0 3.47e-01 100.0% 66.0%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 49.0 3.70e-01 92.1% 41.9%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 44.0 3.16e-01 81.6% 33.5%
4b7yD00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.59 47.0 4.39e-01 88.2% 96.9%
5fmgF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.58 48.0 3.50e-01 92.1% 37.9%
7kznP01 3.30.740.10 Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 0.58 46.0 4.38e-01 89.5% 90.3%
3i5qA02 1.10.167.20 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › 0.56 41.0 4.08e-01 82.9% 74.1%
2vr3B02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 44.0 3.52e-01 86.8% 72.3%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.55 45.0 4.39e-01 90.8% 94.1%
1wgwA00 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.55 40.0 3.76e-01 93.4% 61.6%
5dqqA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.53 43.0 3.65e-01 89.5% 72.7%
4xr9B02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 40.0 3.03e-01 86.8% 84.2%
3ckcA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 42.0 3.33e-01 92.1% 95.5%
1sz9C00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 44.0 3.66e-01 97.4% 70.0%
1y74A00 1.10.287.650 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain 0.50 28.0 3.18e-01 100.0% 71.9%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.50 32.0 3.39e-01 96.1% 73.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3503257 864.1.1.1 ↗ a+b two layers › DLC › DLC › DLC › Dynein_light 0.60 49.0 4.50e-01 88.2% 83.7%
3595156 864.1.1.0 ↗ a+b two layers › DLC › DLC › DLC 0.60 49.0 4.63e-01 88.2% 94.4%
3487926 864.1.1.0 ↗ a+b two layers › DLC › DLC › DLC 0.59 48.0 4.64e-01 88.2% 96.5%
3597342 864.1.1.0 ↗ a+b two layers › DLC › DLC › DLC 0.59 48.0 4.65e-01 88.2% 96.5%
5018508 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 45.0 4.20e-01 82.9% 80.0%
3542626 101.1.1.66 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 0.58 41.0 4.06e-01 73.7% 83.7%
3620174 864.1.1.1 ↗ a+b two layers › DLC › DLC › DLC › Dynein_light 0.56 45.0 4.28e-01 88.2% 92.2%
1827072 223.1.1.1 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PHY 0.56 47.0 3.57e-01 93.4% 96.7%
4360303 223.1.1.84 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PHY+GAF 0.55 45.0 2.90e-01 93.4% 47.4%
5035276 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.91e-01 85.5% 86.7%
3587302 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 4.02e-01 86.8% 82.5%
3722372 3009.1.1.1 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › DSBA 0.51 44.0 3.25e-01 98.7% 94.9%
3464383 3121.1.1.9 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA2_Toc75 0.51 36.0 3.31e-01 93.4% 54.3%
4014064 109.2.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Trehalase 0.51 42.0 2.50e-01 93.4% 68.4%
4543 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.51 41.0 3.44e-01 93.4% 64.6%
5028329 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 3.77e-01 77.6% 89.3%
3989154 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.93e-01 86.8% 82.5%
4206801 605.1.1.301 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › YabA 0.50 41.0 3.70e-01 89.5% 67.6%
3432936 3121.1.1.9 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA2_Toc75 0.50 35.0 3.74e-01 90.8% 86.2%
D2 high residues 151-236_255-281
PDB