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hypothetical_protein_TW95_gp1624

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp1624__YP_009120593__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009120593 ↗
Protein ID:
hypothetical_protein_TW95_gp1624
Kingdom:
euk

Quality

51.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 64-116_295-325
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a7mA01 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.55 41.0 3.78e-01 78.6% 70.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3615147 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.50 41.0 3.36e-01 95.2% 85.5%
D2 medium residues 117-206_265-294
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bbyB04 3.30.70.3450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 4.28e-01 74.2% 88.5%
5t0oA02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.53 37.0 3.96e-01 81.7% 85.4%
4cyuA00 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.50 41.0 3.85e-01 90.8% 89.6%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3252046 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.89 85.0 6.58e-01 100.0% 75.7%
3273326 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.88 84.0 6.29e-01 100.0% 69.6%
3274698 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.88 84.0 6.44e-01 100.0% 85.8%
3276222 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.85 80.0 6.29e-01 99.2% 98.3%
3632181 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.85 81.0 6.80e-01 100.0% 85.4%
3268750 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.84 78.0 6.74e-01 97.5% 82.9%
3273503 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.81 76.0 6.01e-01 100.0% 64.9%
2841988 4959.1.1.0 ↗ a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.58 40.0 3.86e-01 70.8% 92.9%
4217072 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.57 47.0 4.10e-01 90.8% 69.7%
4064121 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.57 46.0 4.11e-01 90.0% 67.2%
4052555 316.1.1.9 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GlnE 0.57 49.0 3.56e-01 97.5% 60.3%
4642603 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.57 46.0 4.14e-01 90.0% 71.4%
3164121 316.1.1.43 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF294 0.57 46.0 4.21e-01 90.0% 75.8%
4053087 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.56 46.0 4.12e-01 90.8% 71.1%
5066779 304.6.1.1 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.56 45.0 3.52e-01 84.2% 78.0%
4461227 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.56 45.0 4.20e-01 90.0% 78.1%
3767943 304.6.1.1 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.55 43.0 3.67e-01 81.7% 62.6%
3927940 304.36.1.2 ↗ a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › RVT_1 0.55 40.0 4.27e-01 75.8% 91.4%
3253994 304.6.1.3 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.55 45.0 3.37e-01 89.2% 77.9%
4821040 304.6.1.1 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.53 43.0 3.45e-01 86.7% 82.4%
4984977 304.48.1.32 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD 0.51 42.0 3.85e-01 88.3% 94.2%
3637683 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 35.0 3.06e-01 71.7% 92.3%
D3 medium residues 207-218_250-264_393-419
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.57 42.0 3.77e-01 79.6% 85.5%
1tzlA02 3.30.1920.50 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › 0.51 32.0 3.14e-01 96.3% 54.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4880634 223.3.1.1 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.57 30.0 2.99e-01 92.6% 45.8%
3952658 2484.1.1.113 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family2 0.56 38.0 2.98e-01 72.2% 98.4%
3321409 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.50 34.0 2.47e-01 74.1% 93.3%