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hypothetical_protein_TW95_gp1671
Euk-VirPandoravirus_inopinatum
hypothetical_protein_TW95_gp1671__YP_009120640__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009120640 ↗
- Protein ID:
- hypothetical_protein_TW95_gp1671
- Kingdom:
- euk
Quality
53.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 120-216
Domain cluster:
rep: Morn_repeat_protein__YP_009119821__Pandoravirus_inopinatum__1605721__D361-382_400-503
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 4.07e-01 | 91.8% | 91.2% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.56 | 47.0 | 3.72e-01 | 93.8% | 93.6% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 28.0 | 3.35e-01 | 88.7% | 75.4% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 38.0 | 3.98e-01 | 91.8% | 83.1% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.53 | 41.0 | 3.62e-01 | 83.5% | 83.7% |
| 4gs5A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.53 | 36.0 | 3.52e-01 | 99.0% | 63.8% |
| 3kulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 38.0 | 3.94e-01 | 80.4% | 85.4% |
| 8affD01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.51 | 34.0 | 3.67e-01 | 88.7% | 83.3% |
| 2k7iA01 | 3.30.160.160 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like | 0.51 | 27.0 | 3.49e-01 | 81.4% | 100.0% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.51 | 38.0 | 3.40e-01 | 82.5% | 86.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023640 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.72 | 42.0 | 4.58e-01 | 96.9% | 70.9% |
| 3662757 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 32.0 | 2.57e-01 | 74.2% | 23.9% |
| None | — | 0.57 | 39.0 | 2.98e-01 | 91.8% | 31.2% | |
| 3800293 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 38.0 | 3.89e-01 | 99.0% | 72.0% |
| 4955690 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.56 | 38.0 | 4.21e-01 | 99.0% | 95.7% |
| 4944389 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 27.0 | 3.28e-01 | 79.4% | 69.2% |
| 4028996 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 34.0 | 3.05e-01 | 89.7% | 42.8% |
| 3260066 | 1129.1.1.1 ↗ | a+b three layers › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › NDUFA12 | 0.53 | 29.0 | 2.92e-01 | 100.0% | 48.0% |
| 1155906 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.53 | 36.0 | 3.52e-01 | 99.0% | 63.8% |
| 396 | 2.2.1.8 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertus-S5-tox | 0.53 | 36.0 | 3.69e-01 | 72.2% | 79.6% |
| 4017740 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 37.0 | 3.46e-01 | 72.2% | 84.2% |
| 3339301 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 32.0 | 3.77e-01 | 76.3% | 98.3% |
| 3379143 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 45.0 | 3.43e-01 | 100.0% | 93.2% |
| 3445173 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 31.0 | 3.51e-01 | 94.8% | 86.2% |
| 3958367 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.51 | 30.0 | 3.58e-01 | 96.9% | 100.0% |
| 3688082 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 46.0 | 3.96e-01 | 100.0% | 80.7% |
| 4969691 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.50 | 42.0 | 3.29e-01 | 97.9% | 76.3% |
| 3493294 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 38.0 | 3.37e-01 | 93.8% | 54.5% |
D2
high
residues 428-438_453-561
D3
medium
residues 237-370