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hypothetical_protein_TW95_gp1688

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp1688__YP_009120657__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009120657 ↗
Protein ID:
hypothetical_protein_TW95_gp1688
Kingdom:
euk

Quality

77.2 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-105
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wizA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 40.0 4.28e-01 81.2% 84.8%
3deeA01 1.10.150.690 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 0.57 40.0 4.14e-01 72.9% 87.2%
5jfqB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 42.0 3.01e-01 85.4% 41.2%
3qbrX00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.51 38.0 3.30e-01 81.2% 96.9%
3wscA00 1.20.1420.20 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif 0.51 44.0 3.34e-01 100.0% 98.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3856774 110.1.1.18 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death_Lrrd1 0.51 44.0 3.88e-01 99.0% 66.7%
D2 high residues 127-176
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3idwA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.70 59.0 5.49e-01 100.0% 92.4%
6ifsB02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.69 47.0 4.29e-01 74.0% 63.4%
1m6yA02 1.10.150.170 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative methyltransferase TM0872, insert domain 0.68 57.0 4.62e-01 100.0% 68.6%
3d3yA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 48.0 3.11e-01 82.0% 16.6%
2f48A03 1.10.10.480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 0.66 50.0 4.43e-01 84.0% 64.0%
1tr8A02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.65 45.0 4.97e-01 76.0% 94.9%
1a5tA02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.63 46.0 5.02e-01 78.0% 97.5%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.63 51.0 4.66e-01 100.0% 77.3%
2damA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.61 45.0 4.17e-01 82.0% 65.7%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 44.0 2.84e-01 80.0% 25.8%
1zq9A02 1.10.8.480 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.59 42.0 3.48e-01 78.0% 68.4%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 47.0 4.05e-01 100.0% 75.0%
3qxlA00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.58 45.0 2.94e-01 88.0% 68.2%
3oqiA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.58 44.0 2.85e-01 82.0% 25.2%
3ftdA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.58 40.0 3.76e-01 74.0% 98.4%
1w07A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.57 41.0 3.25e-01 80.0% 36.2%
3hx3A01 1.10.8.20 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p 0.56 42.0 3.89e-01 84.0% 91.0%
2id3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 42.0 3.14e-01 84.0% 49.3%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.56 44.0 3.38e-01 90.0% 79.2%
3k7mX02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.55 41.0 2.76e-01 82.0% 53.9%
4jgiA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.52 37.0 3.24e-01 82.0% 47.5%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4168206 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.75 64.0 5.57e-01 100.0% 81.2%
3029394 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.67 50.0 4.92e-01 82.0% 85.2%
3520185 101.1.2.518 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_DNAJC9 0.64 46.0 4.12e-01 80.0% 52.0%
143586 509.1.1.1 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH 0.63 51.0 4.66e-01 100.0% 77.3%
3351184 103.1.1.87 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_At5g58720 0.61 46.0 4.79e-01 84.0% 95.6%
3248561 103.1.1.93 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_RAD5A 0.61 45.0 4.45e-01 80.0% 76.4%
3168024 103.1.1.3 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N 0.60 46.0 3.78e-01 84.0% 83.2%
4206573 148.1.3.39 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › HolB_lid 0.60 44.0 4.63e-01 78.0% 93.3%
3802093 143.1.1.0 ↗ alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain 0.59 46.0 4.23e-01 90.0% 70.0%
3643814 7572.1.1.0 ↗ a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain 0.59 44.0 3.03e-01 88.0% 20.5%
3969473 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.59 43.0 3.11e-01 84.0% 95.8%
3587541 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.58 44.0 3.76e-01 84.0% 67.8%
3214724 101.1.1.75 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.57 40.0 3.81e-01 80.0% 66.2%
3837881 103.1.1.30 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › GIP1_N 0.57 43.0 4.44e-01 84.0% 95.6%
4453281 314.1.1.9 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.55 45.0 2.81e-01 100.0% 21.8%