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hypothetical_protein_TW95_gp1728

Euk-Vir

Pandoravirus_inopinatum

hypothetical_protein_TW95_gp1728__YP_009120697__Pandoravirus_inopinatum__1605721

Identity

Accession:
YP_009120697 ↗
Protein ID:
hypothetical_protein_TW95_gp1728
Kingdom:
euk

Quality

36.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_inopinatum

TaxID: 1605721

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-65
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_277__YP_009481887__Pandoravirus_neocaledonia__2107708__D3-54
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 30.9 2.60e-07 79.3% 78.7%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.90 65.0 7.29e-01 75.9% 95.7%
3ogkB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.86 53.0 6.20e-01 70.7% 90.2%
4i6jB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.79 55.0 6.14e-01 77.6% 100.0%
2i7nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.78 56.0 4.02e-01 93.1% 28.4%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.77 65.0 4.16e-01 91.4% 37.8%
4abxA02 6.10.140.1090 Special › Helix non-globular › Helix Hairpins › 0.77 53.0 4.62e-01 72.4% 50.6%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.72 53.0 4.89e-01 81.0% 97.4%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 57.0 5.20e-01 86.2% 92.2%
1vjxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.71 58.0 4.25e-01 87.9% 67.1%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.69 48.0 4.91e-01 72.4% 73.7%
3fmsA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.69 47.0 3.55e-01 70.7% 31.9%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.67 60.0 4.92e-01 100.0% 95.1%
3tp3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 60.0 4.39e-01 100.0% 60.1%
2g3bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 56.0 4.01e-01 100.0% 61.0%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.63 50.0 4.69e-01 87.9% 91.8%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.63 56.0 4.63e-01 100.0% 98.0%
2id3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 55.0 4.17e-01 100.0% 61.3%
2aw6A02 1.25.40.400 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 52.0 3.50e-01 93.1% 96.8%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.62 49.0 3.90e-01 89.7% 66.4%
4mcoA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.62 48.0 3.09e-01 89.7% 71.5%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.60 43.0 3.75e-01 81.0% 59.6%
5ywwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.58 42.0 3.41e-01 77.6% 50.4%
2ixoA02 1.20.120.1150 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphotyrosyl phosphate activator, C-terminal lid domain 0.58 39.0 3.24e-01 70.7% 87.7%
2r7rA08 1.20.120.1400 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.57 41.0 3.65e-01 75.9% 94.2%
1k8kF00 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 51.0 3.61e-01 100.0% 68.9%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 40.0 3.84e-01 86.2% 95.8%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.71e-01 75.9% 84.5%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2860146 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.93 65.0 6.78e-01 75.9% 79.2%
3390129 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.92 71.0 4.51e-01 84.5% 19.6%
3819371 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 61.0 6.25e-01 75.9% 72.7%
2420136 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 65.0 6.78e-01 75.9% 81.1%
3171073 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 74.0 5.75e-01 87.9% 43.5%
3189958 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.91 66.0 7.39e-01 77.6% 97.8%
3324307 145.1.1.5 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_5 0.90 66.0 6.31e-01 79.3% 67.7%
3370474 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 64.0 6.16e-01 81.0% 66.2%
4422459 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 69.0 6.43e-01 84.5% 67.1%
3316546 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 63.0 6.27e-01 81.0% 71.7%
3315130 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.89 59.0 6.97e-01 70.7% 100.0%
3347634 145.1.1.5 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_5 0.89 65.0 7.32e-01 79.3% 100.0%
3727179 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 65.0 7.37e-01 82.8% 100.0%
3693224 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 59.0 6.90e-01 72.4% 100.0%
3720343 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 59.0 5.10e-01 70.7% 47.1%
3655771 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.88 61.0 4.99e-01 79.3% 42.0%
4012387 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 64.0 5.83e-01 79.3% 60.0%
3399647 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 64.0 6.63e-01 82.8% 83.6%
3683657 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 61.0 5.29e-01 81.0% 50.6%
3299681 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 63.0 6.78e-01 81.0% 90.0%
3667444 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 62.0 6.45e-01 75.9% 96.3%
3339201 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 63.0 7.03e-01 84.5% 100.0%
3202188 207.1.1.309 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_15 0.85 74.0 4.30e-01 96.6% 40.8%
3404584 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 62.0 6.94e-01 79.3% 100.0%
3396126 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.84 63.0 3.78e-01 79.3% 12.6%
3837757 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 58.0 5.31e-01 75.9% 56.0%
3848693 145.1.1.37 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › Kelch_2, F-box-like, Kelch_3, Kelch_KLHDC2_KLHL20_DRC7 0.84 76.0 4.52e-01 100.0% 85.3%
3430952 207.1.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.84 75.0 4.33e-01 98.3% 31.5%
3422989 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.83 74.0 4.29e-01 98.3% 30.4%
3733544 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.83 75.0 4.27e-01 100.0% 24.7%
4284024 207.1.1.224 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF29466, PF29477 0.82 73.0 4.62e-01 98.3% 67.3%
3727492 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 59.0 6.47e-01 77.6% 97.8%
3319774 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 68.0 6.17e-01 89.7% 96.0%
3643098 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 58.0 5.96e-01 77.6% 80.0%
None — 0.81 71.0 4.04e-01 96.6% 31.5%
3639389 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.80 70.0 4.10e-01 98.3% 43.3%
3826138 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.80 72.0 4.19e-01 98.3% 38.4%
3678716 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 61.0 5.68e-01 81.0% 81.4%
3924438 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 61.0 6.27e-01 82.8% 85.5%
3423604 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 57.0 6.07e-01 77.6% 88.0%
4021839 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 59.0 5.22e-01 81.0% 62.4%
3679680 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 71.0 5.60e-01 100.0% 98.3%
3309226 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 66.0 5.26e-01 93.1% 48.7%
3184851 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 65.0 5.71e-01 91.4% 63.5%
3829036 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 68.0 5.73e-01 94.8% 100.0%
3204329 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 66.0 5.34e-01 91.4% 56.2%
3448206 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 58.0 5.93e-01 82.8% 83.6%
3643788 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 59.0 6.12e-01 81.0% 85.5%
3632792 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 55.0 5.87e-01 74.1% 86.0%
3452927 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 56.0 6.11e-01 81.0% 97.8%
3439829 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 68.0 5.83e-01 96.6% 63.3%
3430286 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 58.0 5.98e-01 81.0% 87.3%
3347793 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 63.0 5.80e-01 89.7% 73.3%
3730335 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 59.0 6.31e-01 82.8% 98.0%
4012180 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 64.0 4.80e-01 91.4% 39.3%
3457731 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 67.0 5.98e-01 94.8% 70.0%
3433159 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 51.0 5.72e-01 70.7% 100.0%
3381011 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 68.0 5.26e-01 98.3% 99.2%
3476446 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 68.0 5.79e-01 96.6% 66.7%
3469135 207.1.1.134 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 0.76 68.0 4.11e-01 100.0% 46.8%
3441758 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.76 69.0 4.15e-01 100.0% 43.4%
3461664 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 55.0 6.01e-01 82.8% 100.0%
3810013 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 61.0 5.94e-01 86.2% 93.8%
3916304 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 68.0 5.83e-01 98.3% 63.3%
3403835 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 68.0 5.93e-01 98.3% 71.8%
3180622 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 56.0 5.91e-01 79.3% 94.0%
3443498 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 60.0 5.25e-01 86.2% 61.2%
3698257 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 62.0 5.57e-01 91.4% 73.8%
3650817 207.1.1.116 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 0.74 60.0 3.64e-01 87.9% 44.2%
3321664 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 64.0 3.82e-01 98.3% 40.3%
3725732 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 62.0 5.60e-01 93.1% 72.5%
3658277 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 60.0 6.02e-01 87.9% 85.0%
3312286 207.1.1.134 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 0.74 65.0 3.91e-01 100.0% 44.3%
3437951 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.74 65.0 3.81e-01 100.0% 43.6%
3739768 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 64.0 5.61e-01 98.3% 77.6%
3650217 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 63.0 5.82e-01 96.6% 100.0%
3833961 207.1.1.183 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_2, FBD, LRR_At5g56370 0.72 60.0 3.64e-01 94.8% 41.7%
3834035 145.1.1.26 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › LRR_6, DUF7885 0.71 61.0 3.71e-01 100.0% 43.5%
3834480 207.1.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.71 61.0 3.71e-01 96.6% 100.0%
3464778 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 61.0 5.39e-01 96.6% 72.9%
3697020 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 60.0 3.70e-01 100.0% 48.6%
3726805 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.64 53.0 5.15e-01 94.8% 85.9%
3315665 109.4.1.1146 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_PUB 0.60 51.0 3.97e-01 100.0% 52.1%
3971074 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.55 46.0 3.16e-01 100.0% 59.1%