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hypothetical_protein_TW95_gp1755
Euk-VirPandoravirus_inopinatum
hypothetical_protein_TW95_gp1755__YP_009120724__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009120724 ↗
- Protein ID:
- hypothetical_protein_TW95_gp1755
- Kingdom:
- euk
Quality
77.2
mean pLDDT
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-141
Domain cluster:
rep: hypothetical_protein_pdul_cds_137__YP_008318726__Pandoravirus_dulcis__1349409__D48-141
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 55.0 | 5.67e-01 | 100.0% | 88.9% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 47.0 | 5.14e-01 | 97.9% | 89.7% |
| 3irbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 44.0 | 4.99e-01 | 97.9% | 95.6% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 5.18e-01 | 100.0% | 87.9% |
| 2l0cA00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 47.0 | 4.71e-01 | 100.0% | 79.4% |
| 1wjjA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 50.0 | 4.82e-01 | 100.0% | 77.3% |
| 2chrA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 48.0 | 4.40e-01 | 89.6% | 94.5% |
| 3cyjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 48.0 | 4.45e-01 | 90.6% | 91.0% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 40.0 | 3.87e-01 | 90.6% | 62.3% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.56 | 36.0 | 3.92e-01 | 79.2% | 78.5% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.55 | 34.0 | 3.78e-01 | 79.2% | 80.0% |
| 3f8lB00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.54 | 48.0 | 4.06e-01 | 100.0% | 84.4% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 35.0 | 3.91e-01 | 84.4% | 87.3% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.54 | 41.0 | 3.43e-01 | 81.2% | 63.3% |
| 8in8C01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 43.0 | 3.19e-01 | 90.6% | 95.8% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 33.0 | 3.73e-01 | 81.2% | 88.2% |
| 3sszA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 43.0 | 3.88e-01 | 89.6% | 89.5% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 45.0 | 4.23e-01 | 96.9% | 99.1% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.52 | 39.0 | 3.62e-01 | 81.2% | 64.8% |
| 4u0wA02 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.51 | 45.0 | 3.80e-01 | 100.0% | 83.1% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 38.0 | 3.81e-01 | 91.7% | 78.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929844 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.78 | 67.0 | 6.89e-01 | 100.0% | 97.8% |
| 4937519 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.78 | 66.0 | 6.11e-01 | 100.0% | 73.3% |
| 3326221 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 67.0 | 6.82e-01 | 99.0% | 93.7% |
| 3307397 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 68.0 | 5.90e-01 | 100.0% | 64.3% |
| 3276225 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 60.0 | 5.69e-01 | 100.0% | 72.7% |
| 5052424 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 61.0 | 5.31e-01 | 100.0% | 59.3% |
| 4881270 | 7031.1.1.1 ↗ | a+b complex topology › extracellular domain of BK channel beta4 subunit › extracellular domain of BK channel beta4 subunit › extracellular domain of BK channel beta4 subunit › CaKB | 0.71 | 64.0 | 5.66e-01 | 100.0% | 80.1% |
| 3281968 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 53.0 | 5.34e-01 | 100.0% | 83.2% |
| 3619317 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 53.0 | 4.67e-01 | 100.0% | 56.6% |
| 3750534 | 2.1.1.257 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30832 | 0.67 | 59.0 | 5.24e-01 | 100.0% | 68.9% |
| 140409 | 2.24.1.1 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 | 0.63 | 47.0 | 4.90e-01 | 100.0% | 86.5% |
| 318 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.62 | 50.0 | 4.39e-01 | 100.0% | 58.6% |
| 3660107 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 52.0 | 4.66e-01 | 96.9% | 93.6% |
| 3650703 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 52.0 | 4.43e-01 | 96.9% | 77.6% |
| 3258590 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.60 | 35.0 | 3.57e-01 | 77.1% | 56.8% |
| 4932742 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 53.0 | 4.96e-01 | 100.0% | 79.2% |
| 3396837 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.60 | 41.0 | 4.53e-01 | 78.1% | 95.7% |
| 167858 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.59 | 49.0 | 4.49e-01 | 89.6% | 93.6% |
| 4127161 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 50.0 | 4.94e-01 | 100.0% | 90.0% |
| 3705431 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 51.0 | 4.85e-01 | 100.0% | 85.2% |
| 3819309 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.57 | 39.0 | 4.14e-01 | 82.3% | 78.8% |
| 3495548 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 41.0 | 3.55e-01 | 81.2% | 48.0% |
| 3243872 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.56 | 41.0 | 2.99e-01 | 79.2% | 26.8% |
| 3460645 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.56 | 48.0 | 3.25e-01 | 95.8% | 33.4% |
| 3723475 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 45.0 | 4.07e-01 | 86.5% | 88.5% |
| 3596299 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 42.0 | 4.08e-01 | 81.2% | 76.2% |
| 3517035 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 41.0 | 4.17e-01 | 80.2% | 85.3% |
| 3247265 | 2.1.1.105 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB | 0.55 | 48.0 | 4.11e-01 | 96.9% | 61.3% |
| 3531702 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 47.0 | 4.19e-01 | 97.9% | 92.1% |
| 5056883 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.54 | 46.0 | 4.39e-01 | 95.8% | 99.1% |
| 3274535 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 47.0 | 4.49e-01 | 95.8% | 96.4% |
| 3863708 | 231.1.3.1 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Neutral ceramidase large domain › Ceramidase_alk | 0.54 | 44.0 | 2.83e-01 | 92.7% | 87.2% |
| 4268775 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.54 | 37.0 | 3.39e-01 | 91.7% | 54.4% |
| 3393467 | 2.1.1.105 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB | 0.53 | 47.0 | 4.17e-01 | 100.0% | 68.6% |
| 3663874 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.53 | 45.0 | 2.97e-01 | 93.8% | 60.9% |
| 3577471 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.53 | 39.0 | 3.60e-01 | 80.2% | 90.8% |
| 4974213 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.52 | 45.0 | 3.58e-01 | 94.8% | 71.8% |
| 3590584 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 44.0 | 3.96e-01 | 93.8% | 89.6% |
| 3173646 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 45.0 | 3.84e-01 | 100.0% | 92.1% |
| 3789856 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 34.0 | 3.21e-01 | 78.1% | 55.7% |
| 1002454 | 231.1.3.1 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Neutral ceramidase large domain › Ceramidase_alk | 0.51 | 42.0 | 2.76e-01 | 93.8% | 85.1% |
| 3739762 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.51 | 39.0 | 3.68e-01 | 83.3% | 95.8% |
| 5000726 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 45.0 | 4.12e-01 | 100.0% | 89.2% |
| 4979864 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.51 | 38.0 | 3.41e-01 | 80.2% | 61.5% |
| 4071970 | 4010.1.1.3 ↗ | a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_3 | 0.51 | 44.0 | 3.30e-01 | 96.9% | 51.8% |
| 4548103 | 4010.1.1.3 ↗ | a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_3 | 0.50 | 43.0 | 3.31e-01 | 96.9% | 49.2% |
| 4026006 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 34.0 | 3.60e-01 | 89.6% | 81.2% |
| 2722108 | 243.1.1.67 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C | 0.50 | 35.0 | 3.28e-01 | 99.0% | 56.5% |
D2
medium
residues 16-45_146-184
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 57.0 | 5.15e-01 | 94.2% | 86.0% |
| 4dvqL00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.68 | 59.0 | 3.60e-01 | 100.0% | 32.6% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 46.0 | 4.80e-01 | 94.2% | 77.8% |
| 1op1A00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.65 | 44.0 | 4.19e-01 | 97.1% | 58.5% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 50.0 | 4.61e-01 | 88.4% | 63.3% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 51.0 | 4.45e-01 | 87.0% | 55.7% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 50.0 | 5.03e-01 | 98.6% | 83.1% |