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hypothetical_protein_VACWR040

Euk-Vir

Vaccinia_virus

hypothetical_protein_VACWR040__YP_232922__Vaccinia_virus__10245

Identity

Accession:: YP_232922 ↗
Protein ID:: hypothetical_protein_VACWR040
Kingdom:: euk

Quality

64.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Orthopoxvirus_vaccinia

TaxID: 10245

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-13_56-107

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF11099.14 best	M11L	33.5	7.00e-08	90.8%	23.8%

CATH (20)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4flbA00	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.71	56.0	4.46e-01	86.2%	54.2%
3t5qG01	1.10.150.550	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Arenavirus nucleocapsid protein, head domain	0.65	39.0	3.31e-01	100.0%	37.5%
3ag7A00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.64	44.0	3.69e-01	70.8%	84.8%
4y5jA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.63	52.0	3.59e-01	92.3%	42.3%
2kmuA00	1.10.10.1460	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.62	43.0	4.53e-01	72.3%	89.3%
2mx8A01	1.10.274.70	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain	0.61	41.0	3.48e-01	70.8%	69.9%
1bhaA00	1.10.287.170	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.59	29.0	2.94e-01	72.3%	43.3%
4uz0A00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.58	40.0	3.63e-01	93.8%	52.9%
7fhyB01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.58	49.0	3.28e-01	96.9%	31.6%
4u2xF00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.56	47.0	3.58e-01	100.0%	64.6%
1ze0A01	1.20.120.700	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nitrate reductase, subunit delta (NarJ)	0.56	39.0	3.62e-01	73.8%	91.7%
2fu2A00	1.20.1440.50	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like	0.55	38.0	3.63e-01	72.3%	87.2%
4hehA01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.55	42.0	3.94e-01	86.2%	97.6%
2r5sA02	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.53	43.0	4.05e-01	98.5%	89.8%
1hx8A02	1.20.58.150	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › ANTH domain	0.53	43.0	3.64e-01	92.3%	79.5%
1vi0A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.52	40.0	3.14e-01	84.6%	82.1%
3qdnA02	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	42.0	3.98e-01	95.4%	94.0%
2l6jA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.51	43.0	3.71e-01	100.0%	58.6%
1zbpA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.51	44.0	4.06e-01	100.0%	94.1%
2nn4A00	1.10.287.760	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like	0.50	37.0	3.85e-01	95.4%	85.5%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3716601	109.4.1.265 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CEP104-like_TOG	0.71	62.0	3.97e-01	96.9%	36.3%
5054557	604.3.1.0 ↗	alpha bundles › Spectrin repeat-like › BAG domain › BAG domain	0.70	49.0	4.39e-01	73.8%	95.6%
3808658	509.1.1.1 ↗	alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH	0.66	53.0	4.70e-01	87.7%	63.2%
3823825	101.35.1.23 ↗	alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate	0.62	42.0	4.13e-01	70.8%	100.0%
3957453	4033.1.1.1 ↗	alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N	0.61	48.0	4.12e-01	89.2%	81.8%
3925476	109.4.1.1134 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_INTS8_3	0.60	51.0	3.19e-01	100.0%	23.7%
3394109	109.4.1.643 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG2_C	0.59	45.0	2.71e-01	87.7%	21.2%
3302026	109.4.1.936 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ULK4	0.59	51.0	3.70e-01	100.0%	68.2%
3818055	109.4.1.936 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ULK4	0.57	50.0	2.88e-01	100.0%	16.8%
4300205	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.53	45.0	3.92e-01	93.8%	95.0%
3562870	2484.1.1.204 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073	0.52	45.0	2.73e-01	98.5%	34.1%
3704321	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.51	38.0	3.53e-01	80.0%	89.4%
3785603	109.4.1.210 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19	0.50	43.0	3.42e-01	100.0%	46.9%

D2 medium residues 108-226

PDB

Domain cluster: rep: anti-apoptotic_factor__YP_009407967__Eptesipox_virus__1329402__D6-165

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF11099.14 best	M11L	110.7	1.20e-31	98.3%	74.4%