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hypothetical_protein_VARVgp049
Euk-VirVariola_virus
hypothetical_protein_VARVgp049__NP_042093__Variola_virus__10255
Identity
- Accession:
- NP_042093 ↗
- Protein ID:
- hypothetical_protein_VARVgp049
- Kingdom:
- euk
Quality
69.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Variola_virus
TaxID: 10255
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 163-272
Domain cluster:
rep: er-localized_membrane_protein,_virion_core_protein__YP_009268751__Pteropox_virus__1873698__D149-268
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03394.20 best | Pox_E8 | 160.2 | 9.30e-47 | 100.0% | 46.2% |
D2
medium
residues 35-69_89-115
D3
medium
residues 70-88_116-151
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03394.20 best | Pox_E8 | 62.0 | 9.60e-17 | 67.3% | 14.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rjgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 45.0 | 2.86e-01 | 83.6% | 48.8% |
| 3rhfD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 2.83e-01 | 100.0% | 93.9% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.52 | 40.0 | 3.60e-01 | 89.1% | 65.1% |
| 3fxdC00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.51 | 32.0 | 3.36e-01 | 85.5% | 70.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3596754 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.62 | 48.0 | 4.62e-01 | 89.1% | 98.5% |
| 3685160 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.62 | 50.0 | 4.45e-01 | 100.0% | 62.4% |
| 4956784 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.61 | 47.0 | 4.42e-01 | 87.3% | 88.6% |
| 3611143 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.55 | 41.0 | 2.79e-01 | 87.3% | 36.5% |
| 5013277 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 42.0 | 3.29e-01 | 90.9% | 61.4% |
| 5001606 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.54 | 45.0 | 3.35e-01 | 92.7% | 93.8% |
| 4929917 | 101.1.2.892 ↗ | alpha arrays › HTH › HTH › winged helix domain › ArsR | 0.54 | 41.0 | 3.93e-01 | 85.5% | 81.5% |
| 4611743 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.53 | 40.0 | 3.60e-01 | 92.7% | 86.7% |
| 3698721 | 321.2.1.1 ↗ | a+b two layers › Glutamine synthetase-like › C-terminal domain in urocanase › C-terminal domain in urocanase › Urocanase_C | 0.51 | 44.0 | 2.94e-01 | 100.0% | 58.7% |