hypothetical_protein_VARVgp127

Euk-Vir

Variola_virus

hypothetical_protein_VARVgp127__NP_042171__Variola_virus__10255

Identity

85.0 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Variola_virus

TaxID: 10255

View cluster (34 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-28_322-382

PDB

Domain cluster: rep: putative_intermediate_transcription_factor_VITF-3__YP_009112839__Parapoxvirus_red_deer_HL953__1579460__D300-378

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05718.18 best	Pox_int_trans	88.4	6.00e-25	69.7%	15.7%
PF05718.18	Pox_int_trans	35.5	7.10e-09	33.7%	7.8%

D2 medium residues 29-80_193-215

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05718.18 best	Pox_int_trans	72.1	5.20e-20	70.7%	13.9%
PF05718.18	Pox_int_trans	38.7	7.50e-10	33.3%	6.0%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2pt7C01	3.30.450.90	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase ›	0.65	36.0	3.22e-01	89.3%	38.7%
5cbeE00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.63	35.0	3.82e-01	94.7%	64.1%
3kptA02	2.60.40.740	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.57	49.0	3.97e-01	94.7%	94.3%
3u1kC01	3.30.230.70	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain	0.52	44.0	3.20e-01	97.3%	96.9%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3256726	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.57	48.0	4.18e-01	93.3%	80.9%
4932783	2003.1.5.1 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase	0.53	44.0	2.99e-01	98.7%	90.8%
5056826	4.17.1.1 ↗	beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N	0.52	34.0	3.57e-01	86.7%	76.9%
3197713	2005.1.1.0 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains	0.51	45.0	2.93e-01	100.0%	22.6%
4989279	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.51	41.0	3.86e-01	88.0%	81.1%
2502895	2.27.1.0 ↗	beta barrels › OB-fold	0.50	36.0	3.66e-01	77.3%	90.9%

D3 medium residues 81-134_149-192

PDB

D4 medium residues 216-321

PDB

Domain cluster: rep: viral_intermediate_transcription_factor_VITF-3__YP_005296320__Cotia_virus_SPAn232__930275__D241-299

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05718.18 best	Pox_int_trans	143.8	8.50e-42	100.0%	27.2%