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hypothetical_protein_VARVgp128

Euk-Vir

Variola_virus

hypothetical_protein_VARVgp128__NP_042172__Variola_virus__10255

Identity

Accession:
NP_042172 ↗
Protein ID:
hypothetical_protein_VARVgp128
Kingdom:
euk

Quality

73.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Variola_virus

TaxID: 10255

Cluster

View cluster (58 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 179-354
PDB
Domain cluster: rep: DNA-directed_RNA_polymerase_subunit_beta__YP_009162498__Salmon_gill_poxvirus__1680908__D173-349
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12415.15 best rpo132 64.8 4.50e-18 18.2% 96.9%
D2 high residues 728-772_877-1022
PDB
Domain cluster: rep: KU935715.1__AND75470.1__ME3_309__00309__D264-326_420-534
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00562.34 best RNA_pol_Rpb2_6 99.4 3.30e-28 78.0% 34.1%
PF00562.34 RNA_pol_Rpb2_6 24.4 2.10e-05 24.1% 8.6%
D3 high residues 782-860
PDB
Domain cluster: rep: putative_RNA_polymerase_beta_subunit__YP_009052296__Aureococcus_anophagefferens_virus__1474867__D765-873
D4 high residues 1065-1134
PDB
Domain cluster: rep: DNA-dependent_RNA_polymerase_subunit_rpo132__YP_233026__Vaccinia_virus__10245__D1065-1133
D5 medium residues 153-169_357-422
PDB