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hypothetical_protein_VARVgp132

Euk-Vir

Variola_virus

hypothetical_protein_VARVgp132__NP_042176__Variola_virus__10255

Identity

Accession:: NP_042176 ↗
Protein ID:: hypothetical_protein_VARVgp132
Kingdom:: euk

Quality

71.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Variola_virus

TaxID: 10255

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-115

PDB

Domain cluster: rep: MC130L__NP_044081__Molluscum_contagiosum_virus_subtype_1__10280__D3-150

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06086.19 best	Pox_A30L_A26L	52.4	7.80e-14	87.0%	54.9%

D2 medium residues 116-228

PDB

Domain cluster: representative

CATH (16)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5mmjh01	3.30.1370.30	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 ›	0.60	32.0	3.77e-01	92.9%	74.7%
2wpvE00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.60	53.0	4.00e-01	99.1%	54.3%
3lpzA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.59	53.0	3.92e-01	100.0%	55.3%
2kj8A00	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.55	38.0	3.79e-01	82.3%	67.8%
2vqcA00	1.10.10.1470	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like	0.55	32.0	3.85e-01	94.7%	91.4%
7c1iA01	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.54	35.0	3.71e-01	86.7%	73.0%
2vxzA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	29.0	3.63e-01	94.7%	87.9%
2zkzC00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	28.0	3.14e-01	92.9%	64.4%
2qvoA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	30.0	3.31e-01	89.4%	67.8%
4alzA03	3.30.70.1770	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.53	28.0	3.43e-01	92.0%	84.4%
1u5tA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	33.0	3.84e-01	92.0%	93.3%
1s2oA02	3.90.1070.10	Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 ›	0.52	28.0	3.41e-01	89.4%	81.7%
4asnA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	29.0	3.22e-01	86.7%	67.8%
3cuqA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	34.0	3.85e-01	91.2%	93.8%
4i98C01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	29.0	3.39e-01	90.3%	82.7%
3r31A01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.51	45.0	3.51e-01	100.0%	83.4%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3803650	109.4.1.1335 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif	0.69	47.0	2.91e-01	71.7%	13.0%
3915100	109.3.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2	0.63	41.0	3.61e-01	70.8%	46.3%
3919851	109.4.1.335 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SEN1_N	0.59	42.0	2.73e-01	72.6%	19.8%
3259226	3758.1.1.0 ↗	alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins	0.56	45.0	3.72e-01	85.0%	68.8%
3455661	109.4.1.1269 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif	0.55	39.0	2.64e-01	75.2%	33.2%
3958894	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	29.0	3.28e-01	72.6%	67.1%
3668229	109.4.1.1272 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif	0.52	40.0	2.86e-01	82.3%	36.4%
3284190	7577.1.1.2 ↗	a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3	0.52	45.0	3.12e-01	96.5%	46.5%
5057781	101.1.2.55 ↗	alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB	0.51	28.0	3.24e-01	89.4%	72.5%
4981509	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.51	26.0	3.20e-01	86.7%	77.1%
3588398	101.1.2.93 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_Mga	0.51	29.0	3.23e-01	86.7%	70.6%
4951679	101.1.2.89 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR	0.50	28.0	3.16e-01	85.8%	72.5%

D3 medium residues 229-336

PDB

Domain cluster: rep: A-type_inclusion_protein__YP_009046421__Pigeonpox_virus__10264__D227-336

D4 medium residues 397-520

PDB

D5 medium residues 638-688

PDB