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hypothetical_protein_VARVgp196
Euk-VirVariola_virus
hypothetical_protein_VARVgp196__NP_042240__Variola_virus__10255
Identity
- Accession:
- NP_042240 ↗
- Protein ID:
- hypothetical_protein_VARVgp196
- Kingdom:
- euk
Quality
74.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Variola_virus
TaxID: 10255
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 108-170
Domain cluster:
rep: TNF_alpha_receptor-like_protein__YP_009143315__Raccoonpox_virus__10256__D92-169
D2
high
residues 178-320
Domain cluster:
rep: Viral_TNFR_II-like_c-terminal_fragment__YP_227393__Deerpox_virus_W-848-83__305674__D31-193
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07190.17 best | CrmD_SECRET | 65.6 | 7.60e-18 | 98.6% | 76.2% |
D3
medium
residues 22-107
Domain cluster:
rep: HSPV175__ABH08285__Horsepox_virus__397342__D22-94
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00020.25 best | TNFR_c6 | 33.3 | 7.30e-08 | 46.5% | 94.9% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uwiA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.96 | 82.0 | 8.41e-01 | 88.4% | 95.2% |
| 3u3pA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.91 | 75.0 | 7.71e-01 | 86.0% | 96.4% |
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.90 | 78.0 | 7.90e-01 | 90.7% | 97.6% |
| 3mhdD01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.90 | 75.0 | 7.60e-01 | 87.2% | 95.3% |
| 4mxwS00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.87 | 74.0 | 7.78e-01 | 89.5% | 98.7% |
| 3me4B01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.86 | 73.0 | 7.54e-01 | 88.4% | 96.2% |
| 1sg1X02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.79 | 62.0 | 6.48e-01 | 82.6% | 97.5% |
| 2x10A03 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.77 | 45.0 | 5.04e-01 | 73.3% | 74.6% |
| 4kgqD02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.77 | 59.0 | 6.08e-01 | 80.2% | 96.2% |
| 3thmF00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.76 | 58.0 | 6.16e-01 | 82.6% | 89.6% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.75 | 62.0 | 6.42e-01 | 93.0% | 95.1% |
| 4yn0A02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.72 | 60.0 | 6.14e-01 | 95.3% | 92.8% |
| 5wjfA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.68 | 53.0 | 5.65e-01 | 96.5% | 94.6% |
| 2heyT02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.66 | 55.0 | 5.78e-01 | 100.0% | 98.7% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3876372 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.98 | 84.0 | 8.79e-01 | 88.4% | 97.5% |
| 3911223 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.94 | 80.0 | 8.12e-01 | 88.4% | 95.3% |
| 3558594 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 65.0 | 7.47e-01 | 70.9% | 100.0% |
| 3539066 | 389.1.3.8 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › RANK_CRD_2 | 0.93 | 78.0 | 8.32e-01 | 86.0% | 100.0% |
| 3898988 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 77.0 | 8.31e-01 | 86.0% | 100.0% |
| 4342996 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 79.0 | 8.22e-01 | 88.4% | 96.2% |
| 3887144 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 89.0 | 8.74e-01 | 100.0% | 100.0% |
| 3556262 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.92 | 77.0 | 7.84e-01 | 87.2% | 95.3% |
| 3886488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.92 | 79.0 | 8.03e-01 | 90.7% | 95.3% |
| 1184747 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 75.0 | 7.72e-01 | 86.0% | 97.6% |
| 3553054 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 75.0 | 7.81e-01 | 86.0% | 98.8% |
| 3774474 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 76.0 | 8.14e-01 | 87.2% | 100.0% |
| 3847264 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 77.0 | 7.46e-01 | 89.5% | 81.1% |
| 3871490 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 77.0 | 7.97e-01 | 89.5% | 97.5% |
| 3893267 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.88 | 56.0 | 6.74e-01 | 72.1% | 93.3% |
| 3768685 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.88 | 75.0 | 7.21e-01 | 89.5% | 82.1% |
| 3843570 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 58.0 | 6.88e-01 | 74.4% | 96.7% |
| 3869177 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 70.0 | 7.54e-01 | 84.9% | 97.3% |
| 3921747 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.86 | 74.0 | 7.72e-01 | 89.5% | 97.5% |
| 3880887 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 76.0 | 7.93e-01 | 93.0% | 100.0% |
| 3852777 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.86 | 70.0 | 7.52e-01 | 86.0% | 100.0% |
| 3568618 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 63.0 | 6.98e-01 | 93.0% | 94.3% |
| 3526975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 78.0 | 5.97e-01 | 96.5% | 48.0% |
| 3916366 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 54.0 | 6.65e-01 | 74.4% | 100.0% |
| 3883090 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 71.0 | 7.41e-01 | 89.5% | 96.2% |
| 4618270 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 71.0 | 7.34e-01 | 89.5% | 98.8% |
| 3482382 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.83 | 68.0 | 6.89e-01 | 86.0% | 96.5% |
| 3756712 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.83 | 76.0 | 7.01e-01 | 96.5% | 80.0% |
| 3887726 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 69.0 | 7.17e-01 | 93.0% | 97.5% |
| 3876373 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.81 | 56.0 | 6.45e-01 | 75.6% | 96.8% |
| 3507723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 71.0 | 7.43e-01 | 96.5% | 98.8% |
| 3516979 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.80 | 66.0 | 6.84e-01 | 88.4% | 97.5% |
| 4221424 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 60.0 | 6.26e-01 | 80.2% | 100.0% |
| 3894281 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.78 | 61.0 | 6.21e-01 | 82.6% | 90.6% |
| 4373996 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.78 | 45.0 | 5.18e-01 | 73.3% | 76.9% |
| 3555618 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.78 | 64.0 | 6.76e-01 | 88.4% | 100.0% |
| 3541402 | 389.1.3.26 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › PF27736 | 0.77 | 54.0 | 5.48e-01 | 72.1% | 74.1% |
| 3882488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.77 | 57.0 | 6.37e-01 | 83.7% | 97.1% |
| 3844666 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.76 | 56.0 | 6.21e-01 | 97.7% | 94.3% |
| 3885918 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.75 | 58.0 | 6.18e-01 | 81.4% | 92.0% |
| 3524839 | 389.1.3.24 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6, PF27736 | 0.75 | 59.0 | 5.29e-01 | 82.6% | 67.0% |
| 3562936 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.74 | 58.0 | 6.03e-01 | 82.6% | 97.5% |
| 3879434 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.74 | 58.0 | 5.51e-01 | 82.6% | 82.0% |
| 3891819 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.74 | 60.0 | 6.21e-01 | 100.0% | 92.5% |
| 3540238 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 62.0 | 5.11e-01 | 95.3% | 53.1% |
| 3904702 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.73 | 58.0 | 5.71e-01 | 82.6% | 83.3% |
| 2833473 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.73 | 52.0 | 5.75e-01 | 81.4% | 90.1% |
| 3758936 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.73 | 52.0 | 5.76e-01 | 89.5% | 91.4% |
| 2909867 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 52.0 | 5.81e-01 | 81.4% | 92.8% |
| 3920102 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 60.0 | 6.35e-01 | 94.2% | 100.0% |
| 3893236 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.71 | 59.0 | 6.29e-01 | 91.9% | 100.0% |
| 1184772 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.71 | 60.0 | 6.18e-01 | 95.3% | 96.3% |
| 1184748 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.70 | 59.0 | 6.05e-01 | 95.3% | 95.1% |
| 4377309 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.69 | 60.0 | 6.28e-01 | 95.3% | 100.0% |
| 3910723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.69 | 62.0 | 5.76e-01 | 96.5% | 94.3% |
| 3900125 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.69 | 59.0 | 6.11e-01 | 98.8% | 97.5% |
| 3549809 | 389.1.1.105 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like, Ephrin_CRD | 0.58 | 53.0 | 4.54e-01 | 100.0% | 82.2% |
| 1758209 | 389.1.1.105 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like, Ephrin_CRD | 0.55 | 50.0 | 4.42e-01 | 100.0% | 91.9% |
| 3256438 | 387.1.3.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like | 0.54 | 28.0 | 3.22e-01 | 70.9% | 67.7% |