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hypothetical_protein_WCSV-1gp7

Euk-Vir

Water_chestnut_soymovirus_1

hypothetical_protein_WCSV-1gp7__YP_009254010__Water_chestnut_soymovirus_1__1848040

Identity

Accession:
YP_009254010 ↗
Protein ID:
hypothetical_protein_WCSV-1gp7
Kingdom:
euk

Quality

75.6 mean pLDDT

Taxonomy

Pararnavirae› Artverviricota› Revtraviricetes› Ortervirales› Caulimoviridae› Soymovirus› Water_chestnut_soymovirus_1

TaxID: 1848040

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-148
PDB
Domain cluster: rep: NC_029048.2__YP_009221738.1__PHICD211_20135__00153__D2-127
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13975.12 best gag-asp_proteas 29.1 1.70e-06 70.2% 96.7%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s8iA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.80 70.0 7.20e-01 95.4% 96.8%
1fmbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.78 55.0 6.16e-01 76.3% 91.3%
2fivA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.73 54.0 5.75e-01 76.3% 90.3%
1smrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.70 55.0 5.20e-01 81.7% 86.5%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.66 39.0 4.71e-01 93.1% 90.5%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.64 23.0 3.51e-01 85.5% 78.2%
2gtiA01 3.30.160.820 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like 0.55 23.0 3.18e-01 77.9% 76.6%
1uwyA02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.53 31.0 3.55e-01 100.0% 77.3%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 30.0 3.18e-01 91.6% 63.6%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4984762 1.1.1.17 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.85 68.0 7.14e-01 82.4% 95.0%
4112343 1.1.1.3 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.85 73.0 7.49e-01 89.3% 100.0%
3461051 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.85 72.0 7.45e-01 88.5% 96.8%
3436417 1.1.1.17 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.85 74.0 7.43e-01 90.1% 93.1%
3496964 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.84 73.0 7.53e-01 91.6% 94.4%
3923810 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.84 63.0 6.72e-01 77.1% 93.0%
3833862 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.84 67.0 7.12e-01 82.4% 96.5%
4934668 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.83 65.0 6.62e-01 81.7% 97.7%
3923745 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.83 72.0 7.42e-01 90.8% 96.8%
5032107 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.83 65.0 6.62e-01 81.7% 97.7%
3782336 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.83 75.0 7.60e-01 95.4% 98.5%
4436288 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.83 65.0 7.11e-01 88.5% 97.3%
3938624 1.1.1.17 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.83 68.0 7.22e-01 90.8% 97.4%
3925599 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.83 72.0 7.06e-01 91.6% 94.3%
3925981 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.83 62.0 6.71e-01 88.5% 91.8%
3447999 1.1.1.17 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.82 70.0 7.31e-01 88.5% 99.2%
3449555 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.82 70.0 7.11e-01 89.3% 98.4%
3684739 1.1.1.30 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.82 67.0 7.02e-01 84.7% 97.5%
3934729 1.1.1.3 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.82 71.0 7.33e-01 100.0% 96.0%
5032562 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.82 66.0 6.91e-01 84.0% 96.7%
3421072 1.1.1.30 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.82 65.0 6.97e-01 83.2% 95.7%
3334785 1.1.1.3 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.81 70.0 7.07e-01 90.8% 93.1%
3933534 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.81 57.0 6.65e-01 74.0% 100.0%
3934130 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.81 72.0 7.30e-01 93.9% 95.4%
3370298 1.1.1.3 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.81 63.0 6.82e-01 80.9% 98.2%
3926561 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.80 68.0 7.07e-01 93.9% 96.7%
3520846 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.80 57.0 6.46e-01 86.3% 96.0%
3931768 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.80 68.0 7.00e-01 93.9% 93.6%
3312578 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.80 67.0 6.68e-01 87.8% 88.8%
3652079 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.80 64.0 6.79e-01 83.2% 95.7%
3933581 1.1.1.3 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP 0.79 64.0 6.91e-01 84.7% 99.1%
3941125 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.79 64.0 6.20e-01 84.7% 80.0%
3927455 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.79 69.0 7.02e-01 93.1% 100.0%
4928555 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 60.0 6.23e-01 80.2% 91.9%
4964766 1.1.1.5 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.78 61.0 6.58e-01 89.3% 95.5%
3939777 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 67.0 6.92e-01 93.9% 96.0%
3732052 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 60.0 6.50e-01 79.4% 98.2%
3249073 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.78 66.0 6.88e-01 90.1% 97.5%
3932485 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.78 65.0 6.93e-01 87.8% 99.1%
3337491 1.1.2.29 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RVP 0.78 58.0 6.42e-01 84.7% 96.2%
4933012 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.78 63.0 6.61e-01 85.5% 98.3%
3658254 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.78 55.0 6.27e-01 86.3% 96.0%
3933760 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 57.0 6.15e-01 75.6% 96.4%
3579423 1.1.1.14 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 0.77 65.0 6.23e-01 89.3% 97.3%
3930502 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.77 58.0 6.33e-01 77.9% 98.2%
3366156 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 64.0 6.65e-01 87.8% 99.2%
3785193 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 54.0 5.98e-01 76.3% 90.5%
5023444 1.1.1.5 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease 0.76 61.0 6.60e-01 89.3% 99.1%
3934890 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 56.0 5.86e-01 76.3% 99.2%
3931384 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 59.0 6.46e-01 90.1% 97.3%
3519692 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.76 60.0 5.85e-01 84.0% 75.9%
3933891 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.75 61.0 6.51e-01 90.8% 98.3%
3262861 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.75 59.0 6.27e-01 86.3% 93.9%
3691719 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.75 57.0 6.38e-01 79.4% 100.0%
5034399 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.75 59.0 5.94e-01 83.2% 88.7%
3789010 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.74 57.0 6.27e-01 82.4% 100.0%
3354954 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.74 48.0 5.72e-01 90.1% 95.6%
3929267 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.73 56.0 5.81e-01 90.1% 85.8%
3376354 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.73 60.0 6.37e-01 85.5% 99.1%
3504233 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.73 53.0 5.99e-01 76.3% 99.0%
3660108 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.73 54.0 6.04e-01 80.9% 100.0%
3936101 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.73 51.0 5.90e-01 87.0% 98.9%
3724349 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.72 63.0 6.14e-01 90.8% 95.7%
3924865 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.72 58.0 6.08e-01 88.5% 93.3%
4314521 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.72 59.0 6.29e-01 91.6% 100.0%
3936343 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.71 58.0 5.99e-01 90.1% 90.4%
3933634 1.1.1.18 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 0.71 55.0 6.03e-01 89.3% 100.0%
3437522 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.71 60.0 6.16e-01 90.8% 95.2%
3934133 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.71 55.0 5.96e-01 87.8% 98.2%
3926416 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.70 55.0 5.95e-01 89.3% 98.2%
3824511 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.70 59.0 6.16e-01 90.1% 98.3%
3175039 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.70 58.0 5.94e-01 96.2% 92.8%
3512465 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.68 57.0 5.96e-01 89.3% 98.3%
3450849 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.68 55.0 5.74e-01 90.1% 93.3%
3637570 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.67 57.0 5.94e-01 93.1% 99.2%
3815764 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.64 55.0 5.62e-01 96.2% 96.8%
3635565 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.63 39.0 4.73e-01 70.2% 100.0%
3275056 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.62 29.0 2.49e-01 100.0% 27.5%
4992470 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.61 22.0 3.18e-01 92.4% 70.0%