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hypothetical_protein_YMTVg33L

Euk-Vir

Yaba_monkey_tumor_virus

hypothetical_protein_YMTVg33L__NP_938289__Yaba_monkey_tumor_virus__38804

Identity

Accession:: NP_938289 ↗
Protein ID:: hypothetical_protein_YMTVg33L
Kingdom:: euk

Quality

77.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Yatapoxvirus› Yaba_monkey_tumor_virus

TaxID: 38804

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 151-215

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	72.4	4.40e-20	100.0%	8.9%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fo1B00	3.80.10.10	Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor	0.58	47.0	3.74e-01	100.0%	63.2%
3biqA02	3.90.230.10	Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily	0.53	40.0	2.65e-01	81.5%	92.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3574002	109.4.1.209 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Katanin_con80	0.60	51.0	3.83e-01	100.0%	63.1%
4116935	4033.1.1.1 ↗	alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N	0.60	45.0	3.72e-01	83.1%	80.0%

D2 medium residues 216-280

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	60.5	1.70e-16	100.0%	8.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1dgfA03	1.20.1370.60	Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain ›	0.54	41.0	3.60e-01	89.2%	83.3%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3764760	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.57	46.0	4.12e-01	96.9%	83.8%
3224448	4967.1.1.35 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › PF28867	0.55	46.0	3.11e-01	100.0%	70.7%

D3 medium residues 281-371

PDB

Domain cluster: rep: IEV_morphogenesis__YP_009480564__Sea_otter_poxvirus__1416741__D307-391

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	111.3	7.10e-32	100.0%	12.3%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4wnfA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.59	49.0	3.66e-01	94.5%	43.9%
3k9iA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.54	44.0	4.32e-01	92.3%	95.1%
8axjA01	3.80.10.10	Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor	0.52	45.0	4.02e-01	100.0%	81.0%
3eb2A00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.51	44.0	3.20e-01	100.0%	58.7%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3901909	109.4.1.483 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Neurobeachin	0.60	47.0	4.46e-01	87.9%	96.5%
3709547	4299.1.1.2 ↗	alpha arrays › BSD domain › BSD domain › BSD domain › DUF4476	0.57	45.0	4.55e-01	87.9%	96.7%
4014512	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.55	45.0	3.61e-01	94.5%	88.0%
3518443	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.53	39.0	3.91e-01	97.8%	76.8%

D4 medium residues 372-468

PDB

D5 medium residues 503-529_604-682

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04497.19 best	Pox_E2-like	70.8	1.30e-19	66.0%	9.7%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4nqfA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.55	44.0	4.01e-01	88.7%	90.3%
3pfeA01	3.40.630.10	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases	0.54	41.0	3.05e-01	83.0%	70.3%
2zy2A01	3.90.1150.10	Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1	0.52	37.0	3.38e-01	76.4%	69.9%
1bg1A03	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.52	39.0	3.80e-01	82.1%	92.6%
2gnoA03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.50	42.0	4.28e-01	100.0%	98.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
179205	3144.1.1.1 ↗	alpha arrays › PBS linker domain of phycobilisome linker polypeptide › PBS linker domain of phycobilisome linker polypeptide › PBS linker domain of phycobilisome linker polypeptide › PBS_linker_poly	0.51	34.0	3.20e-01	99.1%	54.1%
3220981	601.16.1.3 ↗	alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › GIT1_C	0.50	41.0	4.06e-01	88.7%	90.9%

D6 medium residues 530-603

PDB