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hypothetical_protein

Euk-Vir

Strawberry_vein_banding_virus

hypothetical_protein__NP_043934__Strawberry_vein_banding_virus__47903

Identity

Accession:
NP_043934 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

66.2 mean pLDDT

Taxonomy

Pararnavirae› Artverviricota› Revtraviricetes› Ortervirales› Caulimoviridae› Caulimovirus› Strawberry_vein_banding_virus

TaxID: 47903

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 258-474
PDB
Domain cluster: rep: putative_translational_transactivator__YP_002519388__Rudbeckia_flower_distortion_virus__587370__D103-311
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ehsA00 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.54 29.0 3.73e-01 85.7% 89.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4453617 327.13.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C 0.56 25.0 3.52e-01 91.7% 87.0%
4945782 5104.1.1.0 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.53 26.0 3.28e-01 75.6% 75.2%
4280402 5104.1.1.1 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.53 27.0 3.35e-01 80.6% 77.0%
3736889 316.1.1.36 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.51 29.0 3.31e-01 80.2% 72.5%
3967521 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.50 28.0 3.23e-01 81.1% 72.0%