hypothetical_protein

Euk-Vir

Hantaan_orthohantavirus

hypothetical_protein__NP_941977__Hantaan_orthohantavirus__1980471

Identity

77.4 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Elliovirales› Hantaviridae› Orthohantavirus› Orthohantavirus_hantanense

TaxID: 1980471

View cluster (28 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-71

PDB

Domain cluster: rep: nucleocapsid_protein__YP_009362056__Cao_Bang_orthohantavirus__1980464__D1-71

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00846.25 best	Hanta_nucleocap	34.2	1.90e-08	100.0%	15.2%

D2 high residues 201-423

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00846.25 best	Hanta_nucleocap	325.0	1.10e-96	100.0%	51.5%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1a00B00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.61	36.0	4.29e-01	92.4%	85.6%
3juiA00	1.25.40.180	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.54	33.0	3.75e-01	85.7%	78.2%
1dd5A01	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.53	24.0	3.38e-01	70.4%	87.2%
5mdtA00	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.52	33.0	3.85e-01	100.0%	90.8%
1abvA00	1.10.520.20	Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase	0.52	19.0	2.74e-01	95.1%	66.7%
1xwjA01	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.51	22.0	2.82e-01	92.8%	66.2%
3mnlB00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.51	36.0	3.90e-01	97.3%	86.8%
5ymrC00	3.20.70.20	Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain ›	0.51	45.0	3.13e-01	97.8%	77.4%
2paqA00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.50	35.0	3.90e-01	98.2%	89.8%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1811356	3644.1.1.1 ↗	alpha complex topology › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Leanyer virus nucleoprotein-related › Hanta_nucleocap	0.95	80.0	7.17e-01	90.1%	66.9%
4796002	192.8.1.2 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Hanta_nucleocap	0.94	77.0	7.09e-01	89.7%	68.6%
3391293	101.1.10.13 ↗	alpha arrays › HTH › HTH › Cyclin-like › DUF3452	0.55	29.0	3.85e-01	84.3%	94.2%
5057281	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.54	27.0	3.17e-01	98.2%	66.0%
3738255	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	29.0	2.58e-01	100.0%	35.0%
4319342	1075.1.2.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX	0.52	37.0	4.10e-01	78.0%	88.6%

D3 medium residues 78-200

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00846.25 best	Hanta_nucleocap	203.4	8.50e-60	100.0%	28.6%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3s8iA00	2.40.70.10	Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases	0.50	29.0	2.92e-01	93.5%	52.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5053029	304.4.1.0 ↗	a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel	0.58	27.0	3.08e-01	88.6%	54.7%
5071539	872.1.1.0 ↗	a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like	0.53	24.0	2.95e-01	83.7%	67.1%