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hypothetical_protein

Euk-Vir

Adoxophyes_orana_nucleopolyhedrovirus

hypothetical_protein__YP_002300605__Adoxophyes_orana_nucleopolyhedrovirus__542343

Identity

Accession:
YP_002300605 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

79.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-116
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07346.17 best DUF1477 94.2 8.80e-27 95.7% 74.8%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3feyA02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.75 64.0 4.98e-01 91.5% 88.0%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.73 63.0 4.80e-01 92.6% 45.0%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.68 53.0 4.72e-01 83.0% 91.0%
4ip8A00 1.10.132.110 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein 0.68 55.0 5.38e-01 92.6% 80.0%
2qsbA00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.67 45.0 4.69e-01 88.3% 75.3%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.66 50.0 4.69e-01 80.9% 100.0%
3u61D03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.66 46.0 4.69e-01 91.5% 74.7%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.66 50.0 5.22e-01 80.9% 93.1%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 45.0 4.47e-01 76.6% 66.7%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.65 49.0 4.71e-01 78.7% 88.7%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 50.0 5.03e-01 81.9% 100.0%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.65 49.0 4.66e-01 79.8% 94.5%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 47.0 4.38e-01 77.7% 90.8%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.64 49.0 4.57e-01 80.9% 73.0%
4wqoD00 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.64 56.0 4.93e-01 98.9% 76.6%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.63 42.0 4.17e-01 75.5% 63.6%
1werA02 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.62 51.0 4.47e-01 98.9% 58.1%
3lbxB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 48.0 4.63e-01 83.0% 94.4%
3pe0A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 45.0 4.42e-01 75.5% 93.1%
3l6aA01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 50.0 4.10e-01 91.5% 64.2%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.61 45.0 4.69e-01 76.6% 100.0%
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.61 48.0 3.98e-01 84.0% 97.0%
5k3hB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 45.0 3.98e-01 95.7% 54.1%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.60 48.0 4.82e-01 89.4% 88.9%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 46.0 4.51e-01 83.0% 100.0%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.60 52.0 4.26e-01 97.9% 52.8%
3bt5A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.60 44.0 3.81e-01 78.7% 92.1%
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 50.0 4.33e-01 96.8% 73.4%
1d8cA03 1.20.1220.12 Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III 0.59 47.0 4.27e-01 90.4% 83.0%
2ibdA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 50.0 4.37e-01 96.8% 80.3%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 48.0 4.75e-01 88.3% 98.0%
1aluA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.58 40.0 3.41e-01 71.3% 43.9%
3c2gA02 1.10.10.1630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like 0.57 37.0 4.18e-01 77.7% 89.7%
8h6rA01 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.57 46.0 4.85e-01 92.6% 100.0%
3cf6E03 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.56 50.0 4.49e-01 100.0% 71.0%
2juaA00 1.20.1480.30 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Designed four-helix bundle protein 0.56 43.0 4.26e-01 85.1% 76.5%
6wb9201 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 47.0 3.35e-01 94.7% 87.5%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 43.0 4.28e-01 85.1% 85.1%
2c9kA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.55 47.0 3.64e-01 100.0% 54.8%
2clbA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 43.0 3.66e-01 85.1% 81.8%
2qyuA02 1.25.40.300 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein 0.54 47.0 3.76e-01 97.9% 63.1%
2l1lB00 1.20.1440.250 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.54 49.0 4.41e-01 98.9% 83.5%
4kkiA01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.54 48.0 3.44e-01 100.0% 50.9%
2ddhA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 38.0 3.46e-01 98.9% 53.8%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 44.0 4.58e-01 91.5% 100.0%
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.52 44.0 4.63e-01 97.9% 97.7%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.52 39.0 3.71e-01 85.1% 67.9%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 40.0 3.46e-01 86.2% 87.5%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4018207 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.74 57.0 4.68e-01 80.9% 83.6%
3250429 129.1.1.36 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ABA_GPCR 0.72 64.0 4.49e-01 96.8% 76.4%
3654688 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 61.0 4.39e-01 98.9% 33.8%
3981539 532.2.1.1 alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ 0.69 52.0 5.50e-01 91.5% 93.8%
3723525 109.4.1.15 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS 0.69 56.0 4.77e-01 93.6% 53.1%
3930551 109.4.1.1304 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.69 61.0 4.20e-01 100.0% 32.1%
3711644 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 52.0 4.83e-01 90.4% 64.2%
4433661 3651.1.1.0 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.65 48.0 4.39e-01 87.2% 58.4%
3628755 109.4.1.1493 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle, ZW10_C, ZW10_C2 0.65 56.0 3.38e-01 100.0% 23.8%
4034377 4982.1.1.2 alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › RsbU_N 0.65 54.0 5.56e-01 91.5% 96.7%
3557037 109.4.1.893 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UTP6_C 0.65 56.0 4.73e-01 100.0% 57.5%
4618833 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 52.0 4.29e-01 90.4% 86.3%
3437191 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.64 43.0 4.03e-01 87.2% 56.1%
5054557 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.63 43.0 4.46e-01 70.2% 93.3%
4964270 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.63 48.0 4.74e-01 81.9% 79.0%
3705127 509.1.1.0 alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.63 52.0 5.19e-01 94.7% 89.5%
3940779 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 49.0 4.76e-01 83.0% 96.2%
3506419 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 54.0 4.30e-01 98.9% 63.9%
3691784 611.3.1.6 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › BLM10_N 0.62 52.0 5.20e-01 98.9% 91.6%
3489456 5067.1.1.0 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.62 44.0 3.79e-01 74.5% 69.7%
3277149 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 53.0 3.94e-01 100.0% 36.0%
3903825 611.3.1.0 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.62 46.0 4.85e-01 88.3% 88.2%
3516405 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.62 51.0 3.46e-01 97.9% 23.9%
3929469 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 52.0 4.11e-01 92.6% 72.8%
3970612 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.61 48.0 4.23e-01 86.2% 57.1%
1883676 633.6.1.2 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.61 45.0 3.48e-01 95.7% 36.5%
4951073 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.60 46.0 4.15e-01 83.0% 59.3%
4609538 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.60 47.0 4.45e-01 86.2% 68.7%
3934049 109.4.1.155 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med23 0.60 52.0 3.93e-01 100.0% 58.8%
5046177 138.1.1.2 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C 0.60 43.0 4.41e-01 85.1% 80.0%
4026893 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.60 52.0 4.03e-01 95.7% 52.7%
3684623 109.4.1.1997 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, HEAT_GCN1_C_2 0.59 51.0 3.88e-01 98.9% 51.2%
5003870 138.1.1.2 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C 0.59 42.0 4.36e-01 81.9% 81.2%
2528132 601.35.1.1 alpha bundles › Four-helical up-and-down bundle › Nucleotidyl transferase L544 helical domain › Nucleotidyl transferase L544 helical domain › L544_helical 0.59 46.0 3.87e-01 86.2% 49.4%
3828 604.6.1.1 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.59 48.0 4.54e-01 88.3% 82.1%
54236 633.6.1.0 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.59 43.0 3.38e-01 96.8% 36.9%
3631582 604.7.1.0 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.58 46.0 4.60e-01 88.3% 100.0%
3494774 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.58 48.0 3.94e-01 90.4% 81.8%
4945181 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.58 45.0 4.09e-01 86.2% 61.5%
3472981 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.57 46.0 3.91e-01 89.4% 87.5%
4034363 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 45.0 4.33e-01 92.6% 90.9%