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hypothetical_protein
Euk-VirAdoxophyes_orana_nucleopolyhedrovirus
hypothetical_protein__YP_002300631__Adoxophyes_orana_nucleopolyhedrovirus__542343
Identity
- Accession:
- YP_002300631 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
75.5
mean pLDDT
Taxonomy
TaxID: 542343
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 260-395
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05092.18 best | PIF | 64.7 | 1.00e-17 | 99.3% | 23.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gexA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.64e-01 | 95.6% | 64.4% |
| 4lgqA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.78e-01 | 94.9% | 72.2% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 34.0 | 3.43e-01 | 95.6% | 60.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839261 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.55 | 37.0 | 3.99e-01 | 91.2% | 79.0% |
| 4955075 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.52 | 28.0 | 3.77e-01 | 71.3% | 100.0% |
| 3709133 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 35.0 | 3.74e-01 | 99.3% | 80.0% |
| 4201044 | 304.109.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › PF27137 | 0.50 | 35.0 | 3.73e-01 | 94.1% | 80.0% |
D2
high
residues 421-523
Domain cluster:
rep: pif-1__YP_009552247__Malacosoma_neustria_nucleopolyhedrovirus__38012__D405-533
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05092.18 best | PIF | 33.4 | 3.10e-08 | 99.0% | 10.7% |
D3
medium
residues 67-206
Domain cluster:
rep: per-os_infectivity_factor__YP_667927__Neodiprion_abietis_NPV__204507__D75-207
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05092.18 best | PIF | 207.7 | 4.70e-61 | 100.0% | 25.7% |