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hypothetical_protein

Euk-Vir

Apocheima_cinerarium_nucleopolyhedrovirus

hypothetical_protein__YP_006607816__Apocheima_cinerarium_nucleopolyhedrovirus__307461

Identity

Accession:: YP_006607816 ↗
Protein ID:: hypothetical_protein
Kingdom:: euk

Quality

80.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Apocheima_cinerarium_nucleopolyhedrovirus

TaxID: 307461

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 38-125

PDB

Domain cluster: rep: ac75__YP_009133278__Lambdina_fiscellaria_nucleopolyhedrovirus__1642929__D57-127

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06648.18 best	AcMNPV_Ac75	83.1	2.80e-23	98.9%	69.1%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1rfzA00	1.10.3760.10	Mainly Alpha › Orthogonal Bundle › YutG-like › PgpA-like	0.60	48.0	3.96e-01	87.5%	89.0%
3hl6A02	1.20.58.700	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.59	42.0	3.88e-01	100.0%	56.5%
1nt2B03	1.10.246.90	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Nop domain	0.57	48.0	4.65e-01	96.6%	91.8%
1y8aA02	1.10.3870.10	Mainly Alpha › Orthogonal Bundle › AF1437-like domain fold › AF1437-like domain superfamily	0.54	41.0	3.75e-01	81.8%	87.9%
2bnlC00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.53	41.0	3.63e-01	98.9%	56.0%
1st6A02	1.20.120.810	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle	0.52	42.0	3.13e-01	94.3%	33.1%
3fdqA01	1.20.120.1030	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain	0.51	41.0	3.74e-01	88.6%	98.4%
2hfiA00	1.20.120.440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like	0.51	43.0	3.84e-01	100.0%	65.9%
2zcxA00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.51	41.0	3.24e-01	92.0%	71.2%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3736557	3718.1.1.0 ↗	alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT	0.66	50.0	5.20e-01	86.4%	88.7%
4530585	5069.1.3.121 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › IspA	0.62	51.0	4.83e-01	90.9%	84.3%
4003455	198.1.1.0 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like	0.60	42.0	4.40e-01	90.9%	79.7%
4960528	142.1.1.53 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › CxxCxxCC	0.56	49.0	4.03e-01	97.7%	77.9%
4324738	160.1.1.1 ↗	alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C	0.55	49.0	3.97e-01	97.7%	78.8%
3579019	5001.1.1.31 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › GPR180-TMEM145_TM	0.55	47.0	3.73e-01	94.3%	52.2%
3986597	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.54	35.0	3.56e-01	90.9%	68.2%
3997950	5069.1.3.56 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › GOST_TM	0.53	47.0	4.76e-01	98.9%	98.9%
5009371	5060.2.1.1 ↗	alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF	0.53	38.0	3.47e-01	77.3%	84.0%
3789719	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.51	42.0	4.19e-01	100.0%	87.4%
4111212	622.4.1.30 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › ETR1_N	0.51	44.0	4.31e-01	100.0%	87.0%
4030265	633.22.1.0 ↗	alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR)	0.50	45.0	3.50e-01	100.0%	61.3%
3666426	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.50	37.0	3.65e-01	81.8%	73.7%