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hypothetical_protein

Euk-Vir

Epinotia_aporema_granulovirus

hypothetical_protein__YP_006908634__Epinotia_aporema_granulovirus__166056

Identity

Accession:
YP_006908634 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

70.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Epinotia_aporema_granulovirus

TaxID: 166056

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-67
PDB
Domain cluster: rep: hypothetical_protein_PsunGV_gp175__YP_003422514__Pseudalatia_unipuncta_granulovirus__36355__D13-66
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 47.0 4.70e-01 71.0% 100.0%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 44.0 4.15e-01 71.0% 79.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.63e-01 71.0% 84.2%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 51.0 3.98e-01 85.5% 80.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 44.0 4.51e-01 71.0% 91.5%
6l6jA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 50.0 3.94e-01 87.1% 81.6%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 41.0 4.16e-01 71.0% 68.3%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 38.0 3.37e-01 79.0% 41.1%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 43.0 4.19e-01 72.6% 75.7%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 43.0 4.01e-01 75.8% 69.1%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 43.0 3.76e-01 74.2% 85.4%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 53.0 3.88e-01 96.8% 87.5%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 42.0 4.17e-01 72.6% 87.5%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 41.0 4.02e-01 72.6% 83.6%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.59 43.0 2.72e-01 79.0% 57.5%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.59 43.0 3.87e-01 79.0% 77.5%
3m2oA01 3.30.720.120 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.59 36.0 3.87e-01 79.0% 71.7%
3a7fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 43.0 3.77e-01 77.4% 84.9%
3gvpA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 38.0 2.87e-01 82.3% 25.2%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 39.0 2.97e-01 79.0% 28.5%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 43.0 4.36e-01 75.8% 98.3%
4govA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 39.0 3.19e-01 71.0% 96.9%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.57 40.0 3.29e-01 74.2% 46.6%
1ecsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 35.0 2.81e-01 79.0% 31.7%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.57 42.0 3.50e-01 80.6% 70.8%
3vsfA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 39.0 3.14e-01 74.2% 95.7%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 3.29e-01 80.6% 88.9%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 41.0 3.41e-01 80.6% 67.5%
2id0A04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 3.64e-01 77.4% 97.7%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.67e-01 87.1% 96.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.12e-01 90.3% 84.9%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 39.0 3.59e-01 75.8% 100.0%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 39.0 3.94e-01 77.4% 95.1%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 41.0 4.18e-01 88.7% 83.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.53 41.0 4.03e-01 87.1% 98.5%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 39.0 3.69e-01 80.6% 94.8%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 4.28e-01 96.8% 86.3%
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.52 34.0 3.14e-01 79.0% 50.0%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.73e-01 90.3% 80.8%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 38.0 3.22e-01 80.6% 72.6%
5h1kB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 37.0 2.44e-01 82.3% 15.4%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 40.0 2.59e-01 91.9% 88.8%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 50.0 4.95e-01 72.6% 69.2%
4059146 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 47.0 4.67e-01 71.0% 100.0%
None — 0.69 51.0 2.84e-01 79.0% 83.5%
4250239 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 47.0 4.67e-01 71.0% 100.0%
4168836 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.68 48.0 4.58e-01 72.6% 98.6%
None — 0.68 50.0 2.77e-01 79.0% 76.7%
2410067 330.7.1.2 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.67 43.0 4.34e-01 80.6% 65.6%
3406803 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 49.0 4.75e-01 80.6% 84.3%
5011618 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 3.68e-01 79.0% 40.7%
5024595 4333.1.1.2 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C 0.65 47.0 2.98e-01 77.4% 46.6%
3381974 2003.1.2.47 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NDH2_C 0.64 49.0 3.29e-01 80.6% 73.3%
3240406 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.64 51.0 4.23e-01 88.7% 100.0%
4121981 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.64 52.0 4.11e-01 88.7% 84.8%
5065152 4333.1.1.0 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain 0.64 50.0 3.22e-01 85.5% 47.7%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.92e-01 77.4% 94.5%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.89e-01 77.4% 92.7%
4978946 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 46.0 4.76e-01 77.4% 100.0%
4010184 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.63 50.0 4.02e-01 88.7% 88.0%
4119533 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.63 44.0 4.51e-01 72.6% 98.3%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 43.0 4.94e-01 79.0% 97.8%
3923813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.67e-01 80.6% 100.0%
3982652 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.62 50.0 3.87e-01 90.3% 76.6%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.97e-01 83.9% 95.0%
4987320 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 42.0 4.28e-01 71.0% 100.0%
5072502 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 43.0 4.43e-01 74.2% 98.3%
3243842 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 40.0 3.44e-01 71.0% 52.7%
4475796 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 41.0 4.32e-01 71.0% 100.0%
4947996 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 41.0 4.37e-01 72.6% 100.0%
5057503 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.59 42.0 4.30e-01 74.2% 98.3%
3576438 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 3.98e-01 82.3% 70.0%
3791430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 40.0 4.17e-01 71.0% 96.4%
3948516 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.59 43.0 4.23e-01 75.8% 98.5%
3469800 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 41.0 3.84e-01 74.2% 68.8%
3611012 7577.1.1.1 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.58 40.0 2.38e-01 72.6% 86.7%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.57 45.0 4.34e-01 85.5% 81.4%
5033076 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 42.0 4.46e-01 77.4% 100.0%
3778919 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 41.0 2.59e-01 79.0% 13.6%
4062751 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.57 41.0 4.20e-01 75.8% 95.0%
4958343 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.57 42.0 3.78e-01 82.3% 55.6%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.66e-01 87.1% 100.0%
3216228 381.1.1.0 ↗ few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat 0.56 40.0 3.35e-01 79.0% 50.4%
3244960 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 38.0 3.54e-01 71.0% 77.3%
3517728 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.54 43.0 4.22e-01 88.7% 81.4%
3487990 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 38.0 3.16e-01 74.2% 67.0%
3749194 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.53 37.0 3.72e-01 74.2% 82.8%
3618504 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.53 36.0 3.73e-01 72.6% 96.7%
2137571 206.1.1.74 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.52 44.0 3.37e-01 91.9% 48.6%
5080835 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 38.0 3.97e-01 77.4% 100.0%
4865244 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.79e-01 75.8% 84.1%
4932368 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.51 44.0 2.94e-01 100.0% 30.9%