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hypothetical_protein

Euk-Vir

Thysanoplusia_orichalcea_nucleopolyhedrovirus

hypothetical_protein__YP_007250464__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850

Identity

Accession:
YP_007250464 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

63.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Thysanoplusia_orichalcea_nucleopolyhedrovirus

TaxID: 101850

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 23-62
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10891.14 best DUF2719 52.6 4.40e-14 100.0% 48.1%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uliA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.80 62.0 3.70e-01 87.5% 55.9%
3h9mA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.66 46.0 2.65e-01 100.0% 7.5%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.65 54.0 4.53e-01 100.0% 68.4%
2epcA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.62 42.0 4.37e-01 85.0% 84.8%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.62 50.0 3.37e-01 90.0% 44.4%
4ijdA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.62 41.0 4.43e-01 97.5% 87.1%
4q0jA03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.62 49.0 3.39e-01 90.0% 47.2%
3fogA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 46.0 3.49e-01 82.5% 70.6%
2yrmA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 43.0 4.44e-01 87.5% 83.8%
4gczB03 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 46.0 3.06e-01 80.0% 36.6%
3vhtB02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 40.0 4.07e-01 85.0% 85.3%
2lxwA00 6.10.250.1730 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.56 41.0 3.74e-01 85.0% 58.2%
1xgkA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.54 44.0 3.31e-01 95.0% 42.7%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.52 40.0 3.86e-01 100.0% 80.4%
1s3lA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.51 41.0 2.74e-01 77.5% 27.3%
5dkaA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.51 35.0 2.91e-01 100.0% 33.3%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3708825 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.70 54.0 5.28e-01 85.0% 82.2%
3240415 386.1.1.23 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_3 0.67 50.0 5.23e-01 80.0% 94.3%
3760297 211.1.1.37 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Teneurin_ABD 0.62 46.0 3.32e-01 77.5% 42.5%
2573955 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.61 46.0 4.03e-01 85.0% 62.1%
3570006 386.1.1.37 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zn-C2H2_12 0.60 41.0 4.27e-01 92.5% 96.7%
3513803 377.1.1.92 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LUC7 0.59 43.0 3.63e-01 95.0% 43.8%
2389398 386.1.1.37 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zn-C2H2_12 0.58 42.0 4.36e-01 80.0% 91.4%
3575578 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 47.0 4.13e-01 100.0% 83.1%
3786304 386.1.1.23 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_3 0.57 41.0 4.22e-01 90.0% 91.4%
1269846 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.56 44.0 2.80e-01 85.0% 35.5%
3768792 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.55 45.0 3.70e-01 97.5% 48.8%
5006512 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.55 44.0 4.01e-01 100.0% 65.0%
3741979 3866.1.1.2 ↗ extended segments › Mitochondrial 54S ribosomal protein L25 › Mitochondrial 54S ribosomal protein L25 › Mitochondrial 54S ribosomal protein L25 › Mitoc_mL59 0.55 44.0 3.20e-01 97.5% 52.3%
3760983 3335.1.1.3 ↗ beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C 0.54 45.0 3.49e-01 97.5% 52.0%
3641739 376.1.3.6 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-CW 0.53 36.0 3.36e-01 70.0% 89.1%
3576746 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.53 42.0 2.80e-01 92.5% 27.6%
3360654 376.1.3.57 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_ULT1 0.53 35.0 3.29e-01 70.0% 89.1%