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hypothetical_protein
Euk-VirThysanoplusia_orichalcea_nucleopolyhedrovirus
hypothetical_protein__YP_007250519__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850
Identity
- Accession:
- YP_007250519 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
71.7
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Thysanoplusia_orichalcea_nucleopolyhedrovirus
TaxID: 101850
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-53
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.67 | 51.0 | 3.66e-01 | 87.5% | 32.5% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.66 | 55.0 | 4.16e-01 | 97.9% | 96.0% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.65 | 52.0 | 4.50e-01 | 100.0% | 79.8% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 50.0 | 3.73e-01 | 100.0% | 87.5% |
| 6wh0A01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 46.0 | 3.35e-01 | 100.0% | 33.6% |
| 5hayA02 | 1.25.40.440 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain | 0.56 | 43.0 | 3.88e-01 | 95.8% | 63.3% |
| 4akgA16 | 1.10.8.720 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Region D6 of dynein motor | 0.55 | 47.0 | 3.29e-01 | 97.9% | 87.9% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.55 | 44.0 | 3.79e-01 | 97.9% | 74.7% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 42.0 | 3.29e-01 | 100.0% | 90.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4460746 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.75 | 67.0 | 4.40e-01 | 97.9% | 87.2% |
| 3701284 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 58.0 | 3.72e-01 | 89.6% | 21.3% |
| 4082099 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.71 | 56.0 | 3.43e-01 | 89.6% | 23.8% |
| 3751351 | 3796.1.1.0 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain | 0.71 | 55.0 | 5.04e-01 | 87.5% | 67.7% |
| 3577145 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.66 | 52.0 | 5.02e-01 | 100.0% | 80.0% |
| 3520309 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.66 | 44.0 | 3.96e-01 | 72.9% | 60.0% |
| 3437546 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.65 | 44.0 | 3.82e-01 | 70.8% | 48.8% |
| 3643621 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.65 | 44.0 | 3.78e-01 | 70.8% | 48.8% |
| 4024559 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.63 | 54.0 | 3.70e-01 | 100.0% | 29.2% |
| 4997951 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 50.0 | 4.81e-01 | 93.8% | 87.3% |
| 3590445 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.61 | 53.0 | 3.85e-01 | 97.9% | 85.0% |
| 3836539 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.61 | 50.0 | 3.42e-01 | 95.8% | 26.7% |
| 3658236 | 604.12.1.69 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SRP68 | 0.58 | 46.0 | 3.52e-01 | 93.8% | 50.4% |
| 3935995 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.57 | 46.0 | 4.13e-01 | 100.0% | 62.7% |
| 3826293 | 109.4.1.1296 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long, TPR_24 | 0.57 | 47.0 | 2.97e-01 | 95.8% | 16.6% |
| 3812173 | 109.4.1.1275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.56 | 46.0 | 2.69e-01 | 95.8% | 9.9% |
| 5039478 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 43.0 | 2.54e-01 | 100.0% | 12.0% |
D2
high
residues 63-128