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hypothetical_protein

Euk-Vir

Choristoneura_rosaceana_nucleopolyhedrovirus

hypothetical_protein__YP_008378364__Choristoneura_rosaceana_nucleopolyhedrovirus__58094

Identity

Accession:: YP_008378364 ↗
Protein ID:: hypothetical_protein
Kingdom:: euk

Quality

79.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Choristoneura_rosaceana_nucleopolyhedrovirus

TaxID: 58094

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-36_82-107_149-191

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05959.17 best	DUF884	28.9	1.10e-06	36.2%	17.0%
PF05959.17	DUF884	32.1	1.10e-07	36.2%	19.1%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mv2A00	3.40.20.10	Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin	0.50	44.0	3.95e-01	98.1%	85.1%
2xk0A00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.50	26.0	3.07e-01	75.2%	72.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3740216	224.1.1.1 ↗	a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF	0.51	44.0	4.10e-01	95.2%	83.7%

D2 medium residues 37-81_108-148

PDB

Domain cluster: rep: asb144__YP_009112705__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D55-92_112-150

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05959.17 best	DUF884	48.1	1.40e-12	52.3%	25.0%
PF05959.17	DUF884	44.4	2.00e-11	48.8%	20.7%

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3omzA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.57	40.0	3.81e-01	73.3%	90.2%
5d2lE01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.57	40.0	3.78e-01	74.4%	85.2%
7nitA04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.54	37.0	3.40e-01	72.1%	84.3%
5fdyA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.54	37.0	3.33e-01	72.1%	91.9%
3ptyA02	2.60.120.940	Mainly Beta › Sandwich › Jelly Rolls › EmbC, C-terminal domain, subdomain 2	0.53	37.0	3.00e-01	73.3%	100.0%
4gucA00	2.60.40.3720	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.53	38.0	3.43e-01	74.4%	73.0%
2m2dA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	37.0	3.34e-01	73.3%	79.7%
5eo9B02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	35.0	3.45e-01	70.9%	92.6%
5uv6B02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	35.0	3.56e-01	70.9%	88.1%
2c9aA01	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.51	46.0	3.72e-01	100.0%	73.5%
3alxC02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	35.0	3.39e-01	73.3%	97.1%
3shrA02	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.50	37.0	3.14e-01	76.7%	48.9%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5052643	10.1.2.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED)	0.59	43.0	3.83e-01	76.7%	92.8%
None	—		0.57	40.0	3.68e-01	72.1%	69.1%
3773781	11.1.1.99 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set	0.57	39.0	3.29e-01	70.9%	52.4%
3922151	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	38.0	3.68e-01	74.4%	82.0%
3484495	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	38.0	3.64e-01	73.3%	78.0%
3914563	10.2.1.0 ↗	beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins)	0.53	39.0	3.27e-01	80.2%	80.5%
3846901	11.1.1.99 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set	0.53	36.0	3.59e-01	70.9%	82.2%
3508831	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	39.0	3.23e-01	83.7%	69.4%
4446415	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.52	44.0	3.96e-01	98.8%	66.7%
3228824	11.2.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain	0.52	36.0	3.02e-01	70.9%	58.1%
3919991	11.1.1.99 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set	0.52	35.0	3.24e-01	70.9%	66.1%
3505636	10.1.1.10 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM	0.52	46.0	4.11e-01	98.8%	79.2%
3186200	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.51	41.0	4.19e-01	97.7%	89.4%
3275875	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.51	42.0	3.94e-01	98.8%	73.3%
3751025	11.1.1.99 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set	0.51	35.0	2.98e-01	72.1%	53.1%