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hypothetical_protein
Euk-VirMamestra_brassicae_multiple_nucleopolyhedrovirus
hypothetical_protein__YP_009011081__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219
Identity
- Accession:
- YP_009011081 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
63.9
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Mamestra_brassicae_multiple_nucleopolyhedrovirus
TaxID: 78219
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 121-194
D2
medium
residues 15-78
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aslA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 40.0 | 4.00e-01 | 75.0% | 79.4% |
| 1wevA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 39.0 | 3.99e-01 | 76.6% | 85.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 195786 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.60 | 42.0 | 3.70e-01 | 73.4% | 57.6% |
| 8130 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.57 | 40.0 | 3.60e-01 | 73.4% | 67.0% |
| 3268167 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.56 | 42.0 | 4.00e-01 | 84.4% | 91.3% |
| 3361155 | 377.1.1.106 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PHD_NSD | 0.55 | 37.0 | 3.87e-01 | 71.9% | 90.0% |
| 3757524 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.54 | 42.0 | 2.87e-01 | 89.1% | 56.5% |
| 3634154 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.53 | 42.0 | 4.20e-01 | 85.9% | 87.7% |
| 3647832 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.53 | 39.0 | 3.57e-01 | 82.8% | 59.1% |
| 1906689 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.52 | 38.0 | 3.68e-01 | 78.1% | 91.7% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 35.0 | 3.18e-01 | 71.9% | 72.6% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 36.0 | 3.27e-01 | 73.4% | 76.7% |
| 3211575 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.50 | 37.0 | 3.00e-01 | 100.0% | 36.6% |
| 3390444 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.50 | 40.0 | 2.84e-01 | 90.6% | 29.1% |