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hypothetical_protein

Euk-Vir

Mamestra_brassicae_multiple_nucleopolyhedrovirus

hypothetical_protein__YP_009011101__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219

Identity

Accession:
YP_009011101 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

73.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Mamestra_brassicae_multiple_nucleopolyhedrovirus

TaxID: 78219

Cluster

View cluster (19 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 467-627
PDB
Domain cluster: rep: hypothetical_protein__YP_009117049__Pseudoplusia_includens_SNPV_IE__1592335__D492-657
D2 high residues 630-730
PDB
Domain cluster: rep: hypothetical_protein_McnAVgp042__NP_613125__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D640-729
D3 medium residues 16-125
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.76 59.0 5.07e-01 80.9% 97.0%
1dvpA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 63.0 5.79e-01 100.0% 88.6%
3au4A01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.69 60.0 4.95e-01 95.5% 71.4%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 60.0 5.90e-01 95.5% 93.2%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.68 51.0 4.47e-01 78.2% 85.3%
3k7xA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.67 58.0 4.12e-01 96.4% 40.9%
3efzB00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.67 57.0 4.56e-01 94.5% 56.4%
4d49A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 60.0 4.68e-01 100.0% 66.0%
7dvqK01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 58.0 4.97e-01 100.0% 65.3%
4y6cA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 55.0 4.50e-01 98.2% 50.5%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 52.0 4.28e-01 98.2% 48.8%
3p1uA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 52.0 3.47e-01 97.3% 97.1%
6i57A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 44.0 4.29e-01 98.2% 69.6%
3t8vA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.60 52.0 3.78e-01 100.0% 42.5%
2a0uB01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.59 43.0 3.82e-01 76.4% 70.0%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 44.0 4.41e-01 95.5% 78.3%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 49.0 4.80e-01 99.1% 87.4%
4g68A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 40.0 3.35e-01 72.7% 98.0%
2b6cA01 1.20.1660.10 Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) 0.57 48.0 4.78e-01 93.6% 100.0%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 45.0 4.36e-01 97.3% 74.8%
5z62E00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.56 48.0 4.88e-01 100.0% 97.2%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 47.0 4.74e-01 98.2% 95.3%
4i4cB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 48.0 3.33e-01 100.0% 58.5%
1ug3A02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 47.0 4.51e-01 100.0% 93.8%
2qzcA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.52 40.0 3.23e-01 100.0% 41.6%
1e5rB02 1.10.1720.10 Mainly Alpha › Orthogonal Bundle › Proline Oxidase; Chain: A, Domain 2 › L-proline 3-hydroxylase, C-terminal domain 0.51 35.0 3.91e-01 94.5% 94.0%
3bhqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 44.0 3.64e-01 96.4% 81.7%
3sdbA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 40.0 3.30e-01 84.5% 82.6%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3471874 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 65.0 4.56e-01 100.0% 35.1%
3310873 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 62.0 5.37e-01 97.3% 63.6%
3675734 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 56.0 5.86e-01 94.5% 97.0%
3820613 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 61.0 4.39e-01 100.0% 34.7%
3600007 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 58.0 4.33e-01 93.6% 68.7%
3691322 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 57.0 5.03e-01 93.6% 74.4%
3833637 109.4.1.1755 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UTP20_N, UTP20, UTP20_C 0.66 59.0 3.25e-01 100.0% 8.6%
3699486 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 57.0 5.26e-01 94.5% 78.6%
3675632 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 57.0 5.71e-01 96.4% 91.3%
4030566 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 57.0 4.79e-01 98.2% 69.7%
3689532 3924.1.1.1 ↗ alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 0.62 53.0 4.42e-01 94.5% 58.5%
3726128 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 49.0 5.20e-01 90.9% 100.0%
3408591 109.54.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp21 0.62 54.0 4.42e-01 97.3% 51.4%
3250303 109.4.1.1649 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_19 0.62 53.0 4.49e-01 95.5% 67.0%
3750625 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 52.0 4.30e-01 98.2% 50.7%
3809701 109.4.1.401 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NRDE-2 0.61 55.0 4.02e-01 99.1% 47.5%
3495590 109.4.1.649 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 0.61 51.0 4.28e-01 93.6% 53.0%
3487574 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.60 43.0 3.35e-01 72.7% 51.9%
4124238 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 52.0 3.66e-01 98.2% 28.9%
3651068 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 50.0 4.38e-01 97.3% 60.0%
None — 0.60 52.0 4.39e-01 98.2% 56.6%
4013703 109.4.1.1244 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_30 0.59 51.0 4.81e-01 99.1% 81.4%
4480397 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 52.0 3.63e-01 98.2% 73.4%
3380611 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.58 52.0 3.63e-01 100.0% 58.9%
3696238 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.58 51.0 3.07e-01 99.1% 86.5%
3683268 109.4.1.1304 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.58 51.0 3.62e-01 100.0% 48.9%
4943636 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.58 40.0 4.12e-01 70.9% 81.9%
3715124 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 47.0 4.61e-01 98.2% 81.5%
3506230 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 51.0 4.20e-01 100.0% 57.6%
3256075 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 47.0 4.75e-01 90.9% 100.0%
3528398 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 49.0 4.11e-01 99.1% 52.8%
4681695 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 49.0 3.39e-01 97.3% 25.9%
4221264 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 49.0 3.39e-01 96.4% 26.8%
3790626 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 48.0 3.92e-01 98.2% 46.8%
3682606 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 50.0 3.10e-01 98.2% 83.0%
3830525 109.4.1.1529 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_12 0.57 49.0 3.22e-01 99.1% 23.9%
4146789 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 49.0 3.66e-01 98.2% 36.7%
3367159 109.4.1.1529 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_12 0.57 49.0 3.11e-01 98.2% 83.7%
3503986 109.4.1.194 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.57 48.0 4.77e-01 99.1% 91.3%
None — 0.57 49.0 3.04e-01 99.1% 21.0%
3466631 109.4.1.1529 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_12 0.56 48.0 3.20e-01 98.2% 21.0%
3896583 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.56 48.0 4.21e-01 97.3% 61.1%
3616025 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 3.85e-01 98.2% 49.1%
5000486 613.1.1.1 ↗ alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c 0.55 39.0 3.38e-01 74.5% 59.4%
4001047 5001.1.1.63 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srab 0.54 34.0 2.74e-01 78.2% 33.7%
3402433 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 47.0 4.14e-01 100.0% 95.3%
3931221 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.53 43.0 3.76e-01 86.4% 82.4%
3936824 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 43.0 3.00e-01 95.5% 59.0%
3300485 7015.1.1.1 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.51 38.0 2.94e-01 81.8% 92.2%
D4 medium residues 126-219
PDB
Domain cluster: rep: peptidase_MA_superfamily__YP_009552261__Malacosoma_neustria_nucleopolyhedrovirus__38012__D148-255
D5 medium residues 220-364
PDB
Domain cluster: rep: ORF105_protein__YP_009552665__Operophtera_brumata_nucleopolyhedrovirus__1046267__D232-367
D6 medium residues 365-463
PDB
Domain cluster: rep: asb031__YP_009112592__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D385-500