hypothetical_protein

Euk-Vir

Mamestra_brassicae_multiple_nucleopolyhedrovirus

hypothetical_protein__YP_009011202__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219

Identity

85.0 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Mamestra_brassicae_multiple_nucleopolyhedrovirus

TaxID: 78219

View cluster (7 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-78_155-190

PDB

Domain cluster: rep: asb126__YP_009112687__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D1-73_147-173

D2 medium residues 79-154

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1eo0A00	1.20.930.10	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.55	41.0	4.16e-01	81.6%	93.5%
4evxA00	1.10.1740.240	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A ›	0.53	40.0	3.75e-01	82.9%	96.9%
2k8oA00	1.20.5.2120	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.52	35.0	3.77e-01	89.5%	85.0%
2hoqA02	1.10.150.520	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.52	34.0	3.43e-01	80.3%	64.6%
4nooB00	1.10.8.1160	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.52	45.0	4.27e-01	100.0%	94.7%
2x1dA02	1.10.10.2120	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.52	35.0	3.54e-01	90.8%	70.3%
2cfoA04	1.10.8.70	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1	0.51	33.0	3.67e-01	73.7%	94.4%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3245015	3831.1.1.0 ↗	alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311	0.57	49.0	4.91e-01	98.7%	96.2%
3246622	7004.1.1.0 ↗		0.53	37.0	3.56e-01	100.0%	63.3%
3662616	605.1.1.204 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › YGGT	0.51	37.0	3.58e-01	88.2%	66.7%
3880538	632.1.1.28 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF2678	0.50	40.0	3.87e-01	88.2%	100.0%
3223750	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.50	43.0	3.46e-01	97.4%	97.4%