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hypothetical_protein
Euk-VirPseudoplusia_includens_SNPV_IE
hypothetical_protein__YP_009116983__Pseudoplusia_includens_SNPV_IE__1592335
Identity
- Accession:
- YP_009116983 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
69.2
mean pLDDT
Taxonomy
TaxID: 1592335
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-69
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06096.18 best | Baculo_8kDa | 41.8 | 1.20e-10 | 92.2% | 52.4% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.71 | 59.0 | 4.41e-01 | 100.0% | 39.8% |
| 3ihjA02 | 1.10.287.1970 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 45.0 | 5.04e-01 | 78.4% | 89.5% |
| 2x6nD00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.69 | 51.0 | 3.55e-01 | 82.4% | 33.7% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.66 | 50.0 | 3.43e-01 | 100.0% | 26.1% |
| 1v9mA03 | 1.20.1690.10 | Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain | 0.63 | 44.0 | 3.59e-01 | 74.5% | 38.5% |
| 1s4kA00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.63 | 55.0 | 4.08e-01 | 94.1% | 52.5% |
| 5lqdD01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.63 | 54.0 | 3.51e-01 | 98.0% | 23.3% |
| 3he0B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 50.0 | 3.52e-01 | 100.0% | 36.5% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 50.0 | 3.86e-01 | 100.0% | 87.5% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 42.0 | 4.04e-01 | 84.3% | 74.2% |
| 3m9lA02 | 1.10.260.80 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.56 | 42.0 | 4.24e-01 | 90.2% | 78.4% |
| 4pkwA02 | 1.10.2030.10 | Mainly Alpha › Orthogonal Bundle › Anthrax toxin lethal factor, domain 3, chain A › Anthrax toxin lethal factor, domain 3, chain A | 0.56 | 43.0 | 3.98e-01 | 82.4% | 73.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3438255 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.76 | 57.0 | 4.89e-01 | 80.4% | 53.3% |
| 3785454 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.76 | 59.0 | 4.54e-01 | 84.3% | 40.0% |
| 4424957 | 3804.1.1.0 ↗ | alpha bundles › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain | 0.73 | 54.0 | 3.64e-01 | 78.4% | 70.0% |
| 4979210 | 7566.1.1.2 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N | 0.71 | 57.0 | 3.86e-01 | 88.2% | 44.9% |
| 3498604 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.70 | 52.0 | 3.95e-01 | 80.4% | 34.2% |
| 4014996 | 7094.1.1.0 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin | 0.69 | 63.0 | 4.99e-01 | 100.0% | 61.0% |
| 3554599 | 159.1.2.4 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG-like | 0.69 | 57.0 | 4.16e-01 | 100.0% | 36.0% |
| 4028707 | 4163.1.2.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like | 0.69 | 59.0 | 4.49e-01 | 96.1% | 65.8% |
| 3701212 | 630.1.1.1 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind | 0.65 | 59.0 | 4.03e-01 | 100.0% | 75.4% |
| 4520394 | 5063.1.1.1 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK | 0.61 | 53.0 | 4.72e-01 | 94.1% | 69.6% |
| 4929317 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 45.0 | 4.62e-01 | 84.3% | 92.0% |
| 4489819 | 185.1.1.5 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Gliadin | 0.60 | 47.0 | 4.35e-01 | 98.0% | 67.7% |
| 3213470 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.59 | 50.0 | 4.07e-01 | 98.0% | 87.0% |
| 3342751 | 376.1.3.24 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › NSD_PHD | 0.57 | 47.0 | 3.33e-01 | 92.2% | 30.7% |