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hypothetical_protein
Euk-VirCondylorrhiza_vestigialis_MNPV
hypothetical_protein__YP_009118517__Condylorrhiza_vestigialis_MNPV__1592576
Identity
- Accession:
- YP_009118517 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
87.0
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Condylorrhiza_vestigialis_mutiple_nucleopolyhedrovirus
TaxID: 1592576
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-85
Domain cluster:
rep: ac117__YP_009186794__Sucra_jujuba_nucleopolyhedrovirus__1563660__D3-101
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07785.18 best | DUF1623 | 42.5 | 9.00e-11 | 93.9% | 98.9% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.77 | 53.0 | 4.69e-01 | 70.7% | 63.2% |
| 3n79A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.75 | 52.0 | 5.33e-01 | 72.0% | 97.4% |
| 1darA05 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 50.0 | 4.97e-01 | 70.7% | 80.5% |
| 4dzdA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.73 | 50.0 | 5.34e-01 | 70.7% | 98.6% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 51.0 | 5.52e-01 | 79.3% | 97.1% |
| 2ia0B02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.68 | 49.0 | 4.68e-01 | 76.8% | 85.9% |
| 2y8yA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.68 | 46.0 | 4.57e-01 | 70.7% | 94.2% |
| 2z30B00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.66 | 47.0 | 5.22e-01 | 78.0% | 93.8% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.66 | 50.0 | 4.97e-01 | 81.7% | 97.6% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.63 | 46.0 | 4.41e-01 | 76.8% | 95.7% |
| 3tvzB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 51.0 | 4.33e-01 | 90.2% | 96.4% |
| 4ae5C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 50.0 | 4.12e-01 | 90.2% | 96.8% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.61 | 45.0 | 3.92e-01 | 79.3% | 70.2% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 46.0 | 4.69e-01 | 81.7% | 92.6% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.36e-01 | 93.9% | 71.1% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.60 | 43.0 | 4.45e-01 | 75.6% | 98.7% |
| 2yvsA02 | 3.30.70.2560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 41.0 | 4.58e-01 | 84.1% | 98.3% |
| 1sb7A01 | 3.30.2350.20 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, catalytic domain | 0.60 | 52.0 | 3.97e-01 | 100.0% | 70.0% |
| 1konA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.58 | 45.0 | 4.66e-01 | 85.4% | 92.0% |
| 1nm2A01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.58 | 42.0 | 4.52e-01 | 80.5% | 94.1% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 39.0 | 4.14e-01 | 74.4% | 95.8% |
| 3ewgA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.55 | 44.0 | 4.48e-01 | 90.2% | 100.0% |
| 1wg1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 41.0 | 4.39e-01 | 79.3% | 100.0% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 40.0 | 3.37e-01 | 78.0% | 97.3% |
| 4wzuA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 39.0 | 2.58e-01 | 73.2% | 21.2% |
| 3m6uA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.55 | 39.0 | 3.84e-01 | 87.8% | 70.9% |
| 2hiyA01 | 3.30.70.1280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains | 0.54 | 41.0 | 4.10e-01 | 82.9% | 95.5% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.53 | 38.0 | 3.52e-01 | 95.1% | 57.7% |
| 2rt3A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 43.0 | 4.11e-01 | 91.5% | 81.4% |
| 3d2wA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 37.0 | 3.92e-01 | 79.3% | 98.6% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 38.0 | 3.77e-01 | 91.5% | 75.6% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4160926 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.83 | 57.0 | 5.94e-01 | 70.7% | 94.7% |
| 3592967 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.77 | 37.0 | 2.51e-01 | 81.7% | 14.9% |
| 4958887 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.77 | 47.0 | 5.77e-01 | 75.6% | 100.0% |
| 5025039 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.71 | 43.0 | 4.92e-01 | 70.7% | 83.3% |
| 4056668 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.70 | 48.0 | 5.49e-01 | 79.3% | 96.7% |
| 5080144 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.69 | 47.0 | 5.09e-01 | 72.0% | 98.6% |
| 4975002 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 46.0 | 4.73e-01 | 74.4% | 100.0% |
| 5012422 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 48.0 | 4.91e-01 | 78.0% | 83.7% |
| 5007943 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 47.0 | 5.02e-01 | 78.0% | 92.9% |
| 3251139 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.64 | 56.0 | 5.38e-01 | 100.0% | 95.8% |
| 1281472 | 304.155.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in putative transcriptional regulator Jann_0659-related proteins › Ferredoxin-like domain in putative transcriptional regulator Jann_0659-related proteins › PaaX-like_Fer-like | 0.64 | 42.0 | 4.72e-01 | 78.0% | 91.7% |
| 5047232 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 46.0 | 4.32e-01 | 76.8% | 77.0% |
| 5056559 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 45.0 | 4.54e-01 | 76.8% | 88.2% |
| 3772995 | 304.166.1.9 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29949 | 0.63 | 45.0 | 3.90e-01 | 74.4% | 79.2% |
| 4995433 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 48.0 | 4.75e-01 | 81.7% | 84.7% |
| 4033642 | 304.8.1.42 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF3388 | 0.63 | 55.0 | 5.22e-01 | 96.3% | 96.8% |
| 4461494 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.62 | 45.0 | 4.96e-01 | 79.3% | 96.9% |
| 4958723 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 44.0 | 4.74e-01 | 75.6% | 95.7% |
| 5023503 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.62 | 44.0 | 4.75e-01 | 74.4% | 97.1% |
| 4409709 | 304.24.1.16 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PrmA | 0.60 | 49.0 | 4.70e-01 | 90.2% | 96.8% |
| 4006107 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.60 | 46.0 | 4.82e-01 | 84.1% | 100.0% |
| 4080258 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.59 | 43.0 | 4.46e-01 | 76.8% | 88.0% |
| 3942221 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 46.0 | 4.83e-01 | 85.4% | 100.0% |
| 4011243 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 44.0 | 4.28e-01 | 79.3% | 83.3% |
| 3435159 | 304.4.1.55 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GUB_WAK_bind | 0.58 | 46.0 | 3.76e-01 | 86.6% | 50.3% |
| 3936048 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 45.0 | 4.38e-01 | 87.8% | 91.4% |
| 3938553 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 46.0 | 4.03e-01 | 93.9% | 82.2% |
| 5011939 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.55 | 49.0 | 4.20e-01 | 98.8% | 76.9% |
| 4968968 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.55 | 42.0 | 4.24e-01 | 82.9% | 87.5% |
| 3470070 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.55 | 40.0 | 4.21e-01 | 78.0% | 94.7% |
| 3515435 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.55 | 44.0 | 3.37e-01 | 86.6% | 76.8% |
| 5052042 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 40.0 | 3.95e-01 | 80.5% | 78.9% |
| 5012881 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.54 | 41.0 | 4.36e-01 | 82.9% | 100.0% |
| None | — | 0.53 | 47.0 | 3.62e-01 | 100.0% | 58.9% | |
| 5038078 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.52 | 42.0 | 3.65e-01 | 90.2% | 92.6% |
| 3973638 | 331.10.1.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase | 0.51 | 44.0 | 3.28e-01 | 100.0% | 98.3% |