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hypothetical_protein
Euk-VirPerigonia_lusca_single_nucleopolyhedrovirus
hypothetical_protein__YP_009165637__Perigonia_lusca_single_nucleopolyhedrovirus__1675865
Identity
- Accession:
- YP_009165637 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Perigonia_lusca_single_nucleopolyhedrovirus
TaxID: 1675865
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-82
Domain cluster:
rep: hypothetical_protein__YP_009666465__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__DFULL
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jmlA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.55 | 38.0 | 3.80e-01 | 71.8% | 98.8% |
| 3bexA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 35.0 | 3.16e-01 | 82.1% | 45.5% |
| 4d8lA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 43.0 | 3.02e-01 | 93.6% | 90.5% |
| 2cnqA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 38.0 | 3.11e-01 | 85.9% | 41.3% |
| 2fd4A00 | 3.30.40.110 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain | 0.53 | 39.0 | 3.52e-01 | 79.5% | 58.1% |
| 4akgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.51 | 42.0 | 3.38e-01 | 96.2% | 72.6% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.50 | 34.0 | 3.30e-01 | 71.8% | 62.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3722318 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 44.0 | 4.62e-01 | 78.2% | 81.4% |
| 3272172 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 34.0 | 3.38e-01 | 98.7% | 48.8% |
| 3855855 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.57 | 35.0 | 3.17e-01 | 82.1% | 43.6% |
| 3994523 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 35.0 | 3.63e-01 | 83.3% | 67.1% |
| 163446 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.55 | 38.0 | 3.80e-01 | 71.8% | 98.8% |
| 5078462 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.55 | 40.0 | 2.80e-01 | 78.2% | 80.7% |
| 3189966 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.55 | 35.0 | 2.44e-01 | 75.6% | 18.2% |
| 3792558 | 101.1.2.113 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 | 0.51 | 34.0 | 2.88e-01 | 70.5% | 62.1% |
| 3414477 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 29.0 | 3.26e-01 | 92.3% | 76.4% |
| 3655137 | 109.4.1.1289 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 | 0.50 | 42.0 | 2.52e-01 | 94.9% | 24.7% |
| 3646165 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.50 | 30.0 | 2.87e-01 | 71.8% | 45.0% |