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hypothetical_protein

Euk-Vir

Diatraea_saccharalis_granulovirus

hypothetical_protein__YP_009182265__Diatraea_saccharalis_granulovirus__1675862

Identity

Accession:
YP_009182265 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

76.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Diatraea_saccharalis_granulovirus

TaxID: 1675862

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 32-63
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mdyA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.69 48.0 2.93e-01 71.9% 32.9%
7zvsA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.69 48.0 3.04e-01 75.0% 40.7%
3vwaA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.67 46.0 3.06e-01 71.9% 41.3%
4b6lA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.66 46.0 2.92e-01 71.9% 35.3%
2q83A02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.65 45.0 2.75e-01 71.9% 57.1%
2h34A02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.64 46.0 2.99e-01 84.4% 38.7%
2wtvA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.63 45.0 2.92e-01 75.0% 37.1%
2vx3C02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.62 44.0 2.66e-01 71.9% 27.8%
6fdmA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.62 43.0 3.08e-01 71.9% 50.0%
1qhlA00 3.40.1140.10 Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › 0.60 45.0 2.86e-01 93.8% 98.0%
1h0hA02 3.40.50.740 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 41.0 2.47e-01 75.0% 56.1%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 44.0 2.79e-01 87.5% 86.3%
3oz6B02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 42.0 2.55e-01 71.9% 25.8%
2vh2A02 3.40.50.11690 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cell division protein FtsQ/DivIB 0.56 41.0 2.87e-01 90.6% 22.1%
4o7iA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.56 43.0 2.71e-01 87.5% 29.1%
1l6rA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 41.0 2.77e-01 93.8% 19.7%
4pagA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 39.0 2.67e-01 81.2% 100.0%
3rhaA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 36.0 1.99e-01 78.1% 4.1%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.53 39.0 2.19e-01 81.2% 22.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 3.50e-01 100.0% 53.2%
2rb9A02 3.90.650.10 Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain 0.53 36.0 2.35e-01 75.0% 46.1%
1hdiA01 3.40.50.1260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain 0.52 42.0 2.65e-01 100.0% 45.4%
3dclA03 4.10.1180.10 Few Secondary Structures › Irregular › tm1086 fold › tm1086 domain 0.52 38.0 3.67e-01 84.4% 97.4%
1rvkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 37.0 2.78e-01 96.9% 81.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4883556 304.17.1.1 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG 0.72 41.0 2.84e-01 84.4% 17.0%
3971544 1075.3.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold 0.61 43.0 2.52e-01 93.8% 7.9%
3262842 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 41.0 2.22e-01 71.9% 2.6%
3943615 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.61 42.0 3.24e-01 71.9% 30.6%
3484771 375.5.1.1 ↗ few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind 0.60 41.0 3.48e-01 71.9% 83.3%
3636881 282.1.1.0 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.58 44.0 2.82e-01 84.4% 23.7%
3355773 109.4.1.47 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1,CRM1_C,CRM1_repeat,CRM1_repeat_2,CRM1_repeat_3 0.56 37.0 1.96e-01 93.8% 2.0%
3586190 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.55 42.0 3.52e-01 96.9% 44.6%
3998458 377.3.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › SAP30 zinc finger › SAP30 zinc finger › zf-SAP30 0.54 40.0 3.27e-01 81.2% 81.2%
3987436 4333.1.1.1 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S 0.53 40.0 2.32e-01 100.0% 28.2%
3826378 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.53 37.0 3.07e-01 84.4% 64.0%
3728114 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.51 36.0 2.14e-01 71.9% 8.1%
3803639 376.1.4.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR 0.51 37.0 3.19e-01 87.5% 58.5%
4886410 2007.1.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.51 38.0 2.32e-01 81.2% 20.7%