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hypothetical_protein
Euk-VirDiatraea_saccharalis_granulovirus
hypothetical_protein__YP_009182269__Diatraea_saccharalis_granulovirus__1675862
Identity
- Accession:
- YP_009182269 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
76.1
mean pLDDT
Taxonomy
TaxID: 1675862
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-81
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 53.0 | 5.43e-01 | 72.0% | 86.5% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.70 | 48.0 | 4.87e-01 | 72.0% | 90.7% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.69 | 47.0 | 4.64e-01 | 72.0% | 84.3% |
| 4n06A02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.63 | 50.0 | 3.45e-01 | 88.0% | 54.9% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.63 | 47.0 | 4.11e-01 | 80.0% | 73.7% |
| 3n98A02 | 1.20.1430.10 | Mainly Alpha › Up-down Bundle › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase, middle domain | 0.61 | 52.0 | 4.40e-01 | 97.3% | 92.5% |
| 1y8aA02 | 1.10.3870.10 | Mainly Alpha › Orthogonal Bundle › AF1437-like domain fold › AF1437-like domain superfamily | 0.59 | 43.0 | 3.79e-01 | 78.7% | 82.8% |
| 2v14A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 46.0 | 3.88e-01 | 85.3% | 82.8% |
| 1szhA02 | 1.10.150.370 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Caenorhabditis elegans Her-1, C-terminal domain | 0.59 | 44.0 | 4.33e-01 | 82.7% | 78.0% |
| 1bcrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 41.0 | 2.90e-01 | 74.7% | 35.4% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.56 | 44.0 | 3.21e-01 | 89.3% | 55.4% |
| 1pjrA04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.51 | 38.0 | 3.28e-01 | 86.7% | 89.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3785508 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.75 | 53.0 | 5.36e-01 | 73.3% | 84.0% |
| 3597262 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.73 | 50.0 | 4.56e-01 | 72.0% | 71.0% |
| 4484919 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.72 | 50.0 | 4.72e-01 | 72.0% | 78.9% |
| 4419537 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.70 | 48.0 | 4.35e-01 | 70.7% | 73.0% |
| 3569037 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.70 | 48.0 | 4.58e-01 | 72.0% | 78.9% |
| 4148159 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.70 | 48.0 | 4.48e-01 | 72.0% | 78.9% |
| 3389507 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.68 | 51.0 | 4.44e-01 | 81.3% | 77.5% |
| 3796493 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.64 | 50.0 | 5.06e-01 | 88.0% | 100.0% |
| 2816212 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.62 | 50.0 | 3.26e-01 | 88.0% | 37.2% |
| 4393329 | 10.12.1.75 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding_2 | 0.62 | 42.0 | 3.15e-01 | 72.0% | 73.7% |
| 3625660 | 3054.1.1.3 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › MADF_DNA_bdg | 0.59 | 42.0 | 4.08e-01 | 76.0% | 98.8% |
D2
high
residues 86-99_117-193
Domain cluster:
rep: Clas68__YP_009506010__Clostera_anastomosis_granulovirus_B__1986290__D100-111_126-200