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hypothetical_protein

Euk-Vir

Diatraea_saccharalis_granulovirus

hypothetical_protein__YP_009182288__Diatraea_saccharalis_granulovirus__1675862

Identity

Accession:
YP_009182288 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

76.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Diatraea_saccharalis_granulovirus

TaxID: 1675862

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-103
PDB
Domain cluster: rep: ORF103__YP_009345821__Mythimna_unipuncta_granulovirus_B__2169746__D14-100
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 37.0 4.42e-01 71.6% 76.5%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.59 53.0 5.27e-01 99.0% 98.1%
1pp8O00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 36.0 3.75e-01 95.1% 70.1%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.52 40.0 4.27e-01 94.1% 100.0%
1yz6A02 1.10.150.190 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 0.51 34.0 3.69e-01 99.0% 81.6%
3devA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.51 35.0 3.38e-01 86.3% 62.1%
4anjA06 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 27.0 2.70e-01 94.1% 44.2%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968916 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.76 69.0 6.86e-01 100.0% 94.3%
4954530 101.1.9.143 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM 0.71 62.0 5.95e-01 97.1% 100.0%
4028521 101.1.9.30 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.66 43.0 4.26e-01 71.6% 63.8%
3785640 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.66 58.0 5.55e-01 95.1% 98.3%
4674139 101.1.9.30 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.65 43.0 3.98e-01 70.6% 52.3%
3983963 101.1.9.41 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N 0.63 56.0 5.57e-01 98.0% 100.0%
3978692 101.1.9.143 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM 0.63 57.0 5.01e-01 100.0% 91.3%
3349597 101.15.1.13 ↗ alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK 0.62 31.0 3.87e-01 73.5% 80.0%
4997049 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.60 38.0 4.42e-01 91.2% 94.3%
3184841 376.1.1.102 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF26191 0.58 36.0 3.25e-01 98.0% 43.6%
3289373 3601.1.1.0 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain 0.58 34.0 3.08e-01 70.6% 40.7%
3724818 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.57 47.0 3.67e-01 91.2% 94.0%
3212847 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 38.0 3.02e-01 70.6% 86.3%
3951221 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.54 36.0 3.90e-01 90.2% 83.5%
3781580 5104.1.1.2 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 0.53 37.0 3.57e-01 83.3% 63.0%
4523487 304.120.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.53 33.0 3.96e-01 77.5% 98.5%
4975395 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 32.0 3.48e-01 100.0% 72.9%
4095530 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 35.0 3.67e-01 81.4% 74.7%
5066807 3016.1.1.1 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.52 37.0 3.74e-01 81.4% 72.4%
4646162 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.52 32.0 3.76e-01 83.3% 95.4%
3708523 101.1.2.382 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD 0.52 37.0 2.93e-01 73.5% 76.7%
2671 101.1.2.126 ↗ alpha arrays › HTH › HTH › winged helix domain › IBD 0.52 38.0 3.66e-01 76.5% 95.6%
9386 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.51 36.0 2.80e-01 100.0% 32.9%
3206162 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.51 43.0 4.06e-01 95.1% 79.2%
D2 high residues 114-221
PDB
Domain cluster: rep: Bro25__YP_009702174__Heliothis_virescens_ascovirus_3g__1246651__D4-128
D3 high residues 242-340
PDB
Domain cluster: rep: ORF103__YP_009345821__Mythimna_unipuncta_granulovirus_B__2169746__D14-100