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hypothetical_protein
Euk-VirLeporid_alphaherpesvirus_4
hypothetical_protein__YP_009230205__Leporid_alphaherpesvirus_4__481315
Identity
- Accession:
- YP_009230205 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
50.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Leporid_alphaherpesvirus_4
TaxID: 481315
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 118-301
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03584.21 best | Herpes_ICP4_N | 237.9 | 9.10e-71 | 93.5% | 98.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 25.0 | 4.53e-01 | 97.8% | 94.7% |
| 3hl6A02 | 1.20.58.700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 35.0 | 4.29e-01 | 76.1% | 97.4% |
| 4jzaA03 | 1.20.120.1720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 34.0 | 3.73e-01 | 91.3% | 71.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2080131 | 4189.1.1.1 ↗ | alpha arrays › ICP4 DNA-binding domain › ICP4 DNA-binding domain › ICP4 DNA-binding domain › Herpes_ICP4_N | 0.93 | 89.0 | 8.66e-01 | 98.9% | 91.9% |
| 5018387 | 604.18.1.0 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in regulatory ATPase variant A (RavA) › Triple-helical domain in regulatory ATPase variant A (RavA) | 0.61 | 21.0 | 2.76e-01 | 97.8% | 50.5% |
| 3482686 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 25.0 | 3.44e-01 | 100.0% | 84.4% |
| 4321701 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.52 | 27.0 | 3.09e-01 | 88.6% | 65.2% |
| 3742906 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.50 | 28.0 | 3.22e-01 | 76.6% | 74.4% |